Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.62□□□□□ -1.67
Brf1Q8CFK2 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm24273-201ENSMUST00000102332 164 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Mir667-201ENSMUST00000102441 92 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm14359-201ENSMUST00000118883 424 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm7363-201ENSMUST00000119883 399 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm9498-201ENSMUST00000140849 291 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm23167-201ENSMUST00000157155 103 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm23098-201ENSMUST00000157552 299 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm22597-201ENSMUST00000157602 80 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm20773-201ENSMUST00000178940 681 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm23816-201ENSMUST00000179617 132 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm26556-201ENSMUST00000180645 320 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Mir6951-201ENSMUST00000183910 75 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm5372-201ENSMUST00000187540 409 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm45588-201ENSMUST00000211213 630 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm24268-201ENSMUST00000082990 110 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.61□□□□□ -1.67
Brf1Q8CFK2 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm8244-201ENSMUST00000121254 264 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm22491-201ENSMUST00000157190 102 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm24550-201ENSMUST00000158648 279 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm23473-201ENSMUST00000158883 116 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm16303-201ENSMUST00000161498 390 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Mir3104-201ENSMUST00000174911 63 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm18403-201ENSMUST00000192907 529 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm37757-201ENSMUST00000193072 210 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm37001-201ENSMUST00000193377 190 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm44059-201ENSMUST00000204048 351 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm45032-201ENSMUST00000205375 520 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Mir346-201ENSMUST00000083547 98 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.6□□□□□ -1.67
Brf1Q8CFK2 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm14574-201ENSMUST00000120644 279 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm15014-201ENSMUST00000120742 258 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm23332-201ENSMUST00000157424 275 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm25427-201ENSMUST00000157605 103 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm22531-201ENSMUST00000158819 140 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm25369-201ENSMUST00000158848 132 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm24976-201ENSMUST00000158972 135 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm5263-201ENSMUST00000163646 601 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm17183-201ENSMUST00000171170 493 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm25037-201ENSMUST00000175418 110 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm38008-201ENSMUST00000195333 518 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm3010-201ENSMUST00000198805 448 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Brf1Q8CFK2 Gm24626-201ENSMUST00000082621 161 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 141.7 ms