Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.55□□□□□ -2.16
PrkdcP97313 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
PrkdcP97313 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
PrkdcP97313 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.55□□□□□ -2.16
PrkdcP97313 Gm12814-201ENSMUST00000117091 846 ntBASIC1.55□□□□□ -2.16
PrkdcP97313 Gm19257-201ENSMUST00000186121 183 ntBASIC1.55□□□□□ -2.16
PrkdcP97313 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
PrkdcP97313 Gm45078-201ENSMUST00000205343 546 ntBASIC1.55□□□□□ -2.16
PrkdcP97313 AC153975.1-201ENSMUST00000220087 926 ntBASIC1.55□□□□□ -2.16
PrkdcP97313 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.55□□□□□ -2.16
PrkdcP97313 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
PrkdcP97313 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
PrkdcP97313 Gm9496-201ENSMUST00000191295 1601 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Gm14119-201ENSMUST00000119511 235 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Mir200b-201ENSMUST00000083615 70 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
PrkdcP97313 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
PrkdcP97313 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
PrkdcP97313 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC1.54□□□□□ -2.16
PrkdcP97313 Gm21999-201ENSMUST00000165985 387 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
PrkdcP97313 Gm28404-201ENSMUST00000190242 453 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC1.54□□□□□ -2.16
PrkdcP97313 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Gm5358-201ENSMUST00000212814 353 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
PrkdcP97313 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
PrkdcP97313 Gm9225-201ENSMUST00000121921 836 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PrkdcP97313 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PrkdcP97313 AC174082.1-201ENSMUST00000221106 307 ntBASIC1.54□□□□□ -2.16
PrkdcP97313 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Gm27668-201ENSMUST00000184188 120 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Gm43415-201ENSMUST00000201934 750 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PrkdcP97313 Gm23347-201ENSMUST00000083823 82 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Gm38081-201ENSMUST00000192680 1645 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Gm12432-201ENSMUST00000119540 186 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Gm6373-201ENSMUST00000121026 360 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC1.53□□□□□ -2.16
PrkdcP97313 Gm23267-201ENSMUST00000178490 132 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 CT009754.4-201ENSMUST00000221430 565 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PrkdcP97313 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Mir294-201ENSMUST00000104710 84 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Gm6374-201ENSMUST00000159051 788 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 CT030662.1-201ENSMUST00000227380 232 ntBASIC1.53□□□□□ -2.16
PrkdcP97313 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC1.53□□□□□ -2.16
PrkdcP97313 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.53□□□□□ -2.17
PrkdcP97313 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.17
PrkdcP97313 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PrkdcP97313 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PrkdcP97313 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PrkdcP97313 Mir6353-201ENSMUST00000183596 113 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 AC133598.4-202ENSMUST00000225267 469 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC1.52□□□□□ -2.17
PrkdcP97313 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PrkdcP97313 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC1.52□□□□□ -2.17
PrkdcP97313 Gm20776-201ENSMUST00000189940 700 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 Gm19086-201ENSMUST00000190772 665 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
PrkdcP97313 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PrkdcP97313 Snord21-201ENSMUST00000082519 94 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 AC123052.1-201ENSMUST00000220604 4616 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 Gm11430-201ENSMUST00000121317 217 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC1.52□□□□□ -2.17
PrkdcP97313 AC153899.1-201ENSMUST00000214092 1117 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 Gm5653-201ENSMUST00000223393 1337 ntBASIC1.52□□□□□ -2.17
PrkdcP97313 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
PrkdcP97313 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
PrkdcP97313 Gm7195-201ENSMUST00000190869 1707 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Mir7679-201ENSMUST00000183379 63 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC1.51□□□□□ -2.17
PrkdcP97313 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PrkdcP97313 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PrkdcP97313 Gm15846-201ENSMUST00000116022 320 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
PrkdcP97313 Gm28724-202ENSMUST00000194218 295 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Gm42506-201ENSMUST00000202009 150 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PrkdcP97313 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PrkdcP97313 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PrkdcP97313 Gm13532-201ENSMUST00000120373 240 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Gm26345-201ENSMUST00000157534 120 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Gm27326-201ENSMUST00000183504 95 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Gm19080-201ENSMUST00000196082 550 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC1.51□□□□□ -2.17
PrkdcP97313 AC154313.1-201ENSMUST00000217755 3841 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
PrkdcP97313 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PrkdcP97313 Gm27535-201ENSMUST00000183814 157 ntBASIC1.51□□□□□ -2.17
PrkdcP97313 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
PrkdcP97313 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 164.1 ms