Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm14541-201ENSMUST00000118985 157 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm14534-201ENSMUST00000120045 357 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm9225-201ENSMUST00000121921 836 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm25827-201ENSMUST00000157089 107 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm25671-201ENSMUST00000178612 105 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm23307-201ENSMUST00000179167 105 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm25286-201ENSMUST00000179790 105 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm17954-201ENSMUST00000195893 607 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm21112-201ENSMUST00000212224 578 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.2□□□□□ -1.58
Col18a1P39061 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.2□□□□□ -1.58
Col18a1P39061 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col18a1P39061 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.2□□□□□ -1.58
Col18a1P39061 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col18a1P39061 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col18a1P39061 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col18a1P39061 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm24640-201ENSMUST00000116949 126 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm22626-201ENSMUST00000116990 126 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm12891-201ENSMUST00000119358 240 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm11388-201ENSMUST00000120908 159 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm15212-201ENSMUST00000122403 466 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm24727-201ENSMUST00000158231 144 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm22011-201ENSMUST00000158790 123 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm24761-201ENSMUST00000179589 127 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm24488-201ENSMUST00000179934 127 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm25701-201ENSMUST00000179988 127 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm26431-201ENSMUST00000180199 127 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm18384-201ENSMUST00000195974 808 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm43929-201ENSMUST00000203025 409 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm44923-201ENSMUST00000206673 85 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm17990-201ENSMUST00000211728 553 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm3442-201ENSMUST00000216808 710 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC5.19□□□□□ -1.58
Col18a1P39061 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm23609-201ENSMUST00000104542 127 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm11352-201ENSMUST00000119264 517 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm12607-201ENSMUST00000120724 493 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm15147-201ENSMUST00000122263 483 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm24750-201ENSMUST00000157843 104 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm24419-201ENSMUST00000157875 332 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC5.19□□□□□ -1.58
Col18a1P39061 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC5.19□□□□□ -1.58
Col18a1P39061 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col18a1P39061 Gm28148-201ENSMUST00000186924 697 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm29475-201ENSMUST00000190767 312 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Gm2142-201ENSMUST00000197899 589 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 AC153646.2-201ENSMUST00000220516 109 ntBASIC5.19□□□□□ -1.58
Col18a1P39061 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col18a1P39061 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Col18a1P39061 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col18a1P39061 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Gm14825-201ENSMUST00000113538 701 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Gm12771-201ENSMUST00000120246 135 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Gm12222-201ENSMUST00000121368 260 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Gm14362-201ENSMUST00000121679 273 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms