Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC154838.2-201ENSMUST00000226602 747 ntBASIC1.61□□□□□ -2.15
PrkdcP97313 AF357341-201ENSMUST00000083088 75 ntBASIC1.61□□□□□ -2.15
PrkdcP97313 Gm43526-201ENSMUST00000196666 1565 ntBASIC1.61□□□□□ -2.15
PrkdcP97313 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
PrkdcP97313 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC1.61□□□□□ -2.15
PrkdcP97313 Gm12935-201ENSMUST00000119352 246 ntBASIC1.61□□□□□ -2.15
PrkdcP97313 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.61□□□□□ -2.15
PrkdcP97313 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC1.61□□□□□ -2.15
PrkdcP97313 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
PrkdcP97313 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
PrkdcP97313 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PrkdcP97313 Gm15421-202ENSMUST00000118224 399 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Gm29356-201ENSMUST00000186935 373 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC1.6□□□□□ -2.15
PrkdcP97313 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Defa-ps18-201ENSMUST00000098889 371 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PrkdcP97313 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
PrkdcP97313 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PrkdcP97313 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC1.6□□□□□ -2.15
PrkdcP97313 Gm38356-201ENSMUST00000194313 408 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Gm19252-201ENSMUST00000204705 305 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Gm25202-201ENSMUST00000082838 191 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC1.6□□□□□ -2.15
PrkdcP97313 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PrkdcP97313 Gm22988-201ENSMUST00000122759 144 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Gm28975-201ENSMUST00000186412 686 ntBASIC1.6□□□□□ -2.15
PrkdcP97313 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PrkdcP97313 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PrkdcP97313 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
PrkdcP97313 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
PrkdcP97313 Gm24984-201ENSMUST00000104454 133 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.59□□□□□ -2.15
PrkdcP97313 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC1.59□□□□□ -2.15
PrkdcP97313 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
PrkdcP97313 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
PrkdcP97313 Gm23942-201ENSMUST00000101956 107 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC1.59□□□□□ -2.15
PrkdcP97313 Gm16111-201ENSMUST00000162128 285 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Gm17194-201ENSMUST00000164610 348 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Trbv22-201ENSMUST00000191697 291 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 AC125350.4-201ENSMUST00000225895 273 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Mir222-201ENSMUST00000083537 79 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Gm43320-201ENSMUST00000196047 2916 ntBASIC1.59□□□□□ -2.15
PrkdcP97313 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
PrkdcP97313 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Gm24890-201ENSMUST00000104389 102 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC1.59□□□□□ -2.16
PrkdcP97313 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC1.59□□□□□ -2.16
PrkdcP97313 Gm44319-201ENSMUST00000196974 93 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Gm23447-201ENSMUST00000082798 163 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Mir99a-201ENSMUST00000083596 65 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
PrkdcP97313 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PrkdcP97313 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.59□□□□□ -2.16
PrkdcP97313 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.59□□□□□ -2.16
PrkdcP97313 Gm22361-201ENSMUST00000158435 176 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
PrkdcP97313 Mir6352-201ENSMUST00000184495 116 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.59□□□□□ -2.16
PrkdcP97313 AC160550.3-201ENSMUST00000226818 400 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Gm7117-201ENSMUST00000071515 387 ntBASIC1.59□□□□□ -2.16
PrkdcP97313 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
PrkdcP97313 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC1.58□□□□□ -2.16
PrkdcP97313 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PrkdcP97313 Mir592-201ENSMUST00000102113 96 ntBASIC1.58□□□□□ -2.16
PrkdcP97313 Gm11877-201ENSMUST00000118921 852 ntBASIC1.58□□□□□ -2.16
PrkdcP97313 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC1.58□□□□□ -2.16
PrkdcP97313 Gm38334-201ENSMUST00000195060 313 ntBASIC1.58□□□□□ -2.16
PrkdcP97313 Gm43848-201ENSMUST00000198060 1247 ntBASIC1.58□□□□□ -2.16
PrkdcP97313 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PrkdcP97313 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC1.58□□□□□ -2.16
PrkdcP97313 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PrkdcP97313 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC1.58□□□□□ -2.16
PrkdcP97313 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PrkdcP97313 Gm26082-201ENSMUST00000104070 127 ntBASIC1.58□□□□□ -2.16
PrkdcP97313 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PrkdcP97313 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC1.58□□□□□ -2.16
PrkdcP97313 Gm43406-201ENSMUST00000200356 334 ntBASIC1.58□□□□□ -2.16
PrkdcP97313 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC1.58□□□□□ -2.16
PrkdcP97313 Gm4263-202ENSMUST00000221392 667 ntBASIC1.58□□□□□ -2.16
PrkdcP97313 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PrkdcP97313 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PrkdcP97313 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PrkdcP97313 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
PrkdcP97313 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC1.58□□□□□ -2.16
PrkdcP97313 Gm14429-201ENSMUST00000121881 2024 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 266.9 ms