Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col18a1P39061 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col18a1P39061 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col18a1P39061 Gm13603-201ENSMUST00000119404 83 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.25□□□□□ -1.57
Col18a1P39061 Gm26320-201ENSMUST00000157742 306 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm23258-201ENSMUST00000158319 106 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm9071-201ENSMUST00000165915 474 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm17062-201ENSMUST00000166987 461 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col18a1P39061 Gm23093-201ENSMUST00000083450 102 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col18a1P39061 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col18a1P39061 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col18a1P39061 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col18a1P39061 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.25□□□□□ -1.57
Col18a1P39061 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col18a1P39061 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm13510-201ENSMUST00000118659 429 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC5.24□□□□□ -1.57
Col18a1P39061 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm6956-201ENSMUST00000134724 546 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm22236-201ENSMUST00000157093 106 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm23032-201ENSMUST00000157995 107 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Mir6411-201ENSMUST00000183556 108 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.24□□□□□ -1.57
Col18a1P39061 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm18327-201ENSMUST00000202426 830 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm45616-201ENSMUST00000211711 319 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm19599-201ENSMUST00000218898 358 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm21007-201ENSMUST00000221024 326 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 AC133517.1-202ENSMUST00000224409 233 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 AC166095.1-203ENSMUST00000224591 233 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col18a1P39061 Snord42a-201ENSMUST00000082606 65 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm24533-201ENSMUST00000083138 196 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm24457-201ENSMUST00000083196 105 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 AC104897.1-201ENSMUST00000222638 3628 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm8129-201ENSMUST00000118230 213 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm14238-201ENSMUST00000120227 323 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm25982-201ENSMUST00000157920 101 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm24001-201ENSMUST00000158463 85 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm18921-201ENSMUST00000221798 366 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Gm25818-201ENSMUST00000083282 164 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Gm21286-201ENSMUST00000098035 545 ntBASIC5.24□□□□□ -1.57
Col18a1P39061 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col18a1P39061 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Col18a1P39061 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col18a1P39061 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col18a1P39061 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col18a1P39061 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col18a1P39061 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col18a1P39061 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col18a1P39061 Gm15113-201ENSMUST00000119280 836 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 Gm13475-201ENSMUST00000119290 234 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 Gm5060-201ENSMUST00000120072 599 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 Gm24244-201ENSMUST00000157317 130 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 Gm22890-201ENSMUST00000158642 144 ntBASIC5.23□□□□□ -1.57
Col18a1P39061 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
Col18a1P39061 Gm24167-201ENSMUST00000177733 124 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms