Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smco4Q9JIS3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smco4Q9JIS3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.93□□□□□ -0.18
Smco4Q9JIS3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Smco4Q9JIS3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Gm9870-201ENSMUST00000063874 645 ntBASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco4Q9JIS3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms