Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mre11Q61216 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.72■□□□□ 0.91
Mre11Q61216 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mre11Q61216 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mre11Q61216 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Mre11Q61216 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Mre11Q61216 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.71■□□□□ 0.91
Mre11Q61216 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Mre11Q61216 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Mre11Q61216 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Mre11Q61216 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.71■□□□□ 0.91
Mre11Q61216 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mre11Q61216 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Mre11Q61216 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.7■□□□□ 0.9
Mre11Q61216 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.7■□□□□ 0.9
Mre11Q61216 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.7■□□□□ 0.9
Mre11Q61216 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mre11Q61216 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Mre11Q61216 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Mre11Q61216 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Mre11Q61216 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mre11Q61216 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Mre11Q61216 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mre11Q61216 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.69■□□□□ 0.9
Mre11Q61216 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mre11Q61216 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Gm29791-202ENSMUST00000207888 369 ntBASIC20.68■□□□□ 0.9
Mre11Q61216 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.68■□□□□ 0.9
Mre11Q61216 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Mre11Q61216 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.68■□□□□ 0.9
Mre11Q61216 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mre11Q61216 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Mre11Q61216 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.67■□□□□ 0.9
Mre11Q61216 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.67■□□□□ 0.9
Mre11Q61216 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mre11Q61216 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mre11Q61216 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Mre11Q61216 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.66■□□□□ 0.9
Mre11Q61216 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mre11Q61216 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mre11Q61216 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms