Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Uspl1Q3ULM6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Gm15635-204ENSMUST00000208024 2539 ntBASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uspl1Q3ULM6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Gm7370-201ENSMUST00000219471 767 ntBASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Uspl1Q3ULM6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Uspl1Q3ULM6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Uspl1Q3ULM6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Uspl1Q3ULM6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Uspl1Q3ULM6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Gm11620-201ENSMUST00000118770 1845 ntBASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Gm7889-201ENSMUST00000185591 958 ntBASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Gm19439-201ENSMUST00000198195 2273 ntBASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uspl1Q3ULM6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Uspl1Q3ULM6 Gm6433-201ENSMUST00000118634 875 ntBASIC22.23■■□□□ 1.15
Uspl1Q3ULM6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms