Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10A0A075B642 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10A0A075B642 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav10A0A075B642 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav10A0A075B642 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10A0A075B642 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav10A0A075B642 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav10A0A075B642 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav10A0A075B642 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav10A0A075B642 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav10A0A075B642 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Trav10A0A075B642 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.33■□□□□ 0.04
Trav10A0A075B642 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav10A0A075B642 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Gm8520-201ENSMUST00000186517 868 ntBASIC15.32■□□□□ 0.04
Trav10A0A075B642 Gm10517-202ENSMUST00000192970 758 ntBASIC15.32■□□□□ 0.04
Trav10A0A075B642 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.32■□□□□ 0.04
Trav10A0A075B642 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav10A0A075B642 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.32■□□□□ 0.04
Trav10A0A075B642 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav10A0A075B642 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav10A0A075B642 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.3■□□□□ 0.04
Trav10A0A075B642 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav10A0A075B642 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.29■□□□□ 0.04
Trav10A0A075B642 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.29■□□□□ 0.04
Trav10A0A075B642 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms