Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Snord38a-201ENSMUST00000083746 71 ntBASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim9Q8C7M3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Snord66-201ENSMUST00000104051 75 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm22493-201ENSMUST00000104494 132 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm9078-201ENSMUST00000119126 617 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm15313-201ENSMUST00000119179 282 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm11325-201ENSMUST00000119967 469 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm11645-201ENSMUST00000121589 649 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm25334-201ENSMUST00000158036 110 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm6486-201ENSMUST00000166202 434 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm25670-201ENSMUST00000178423 107 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm26239-201ENSMUST00000178842 107 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm21816-201ENSMUST00000179255 360 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm24267-201ENSMUST00000179841 107 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm11394-201ENSMUST00000181421 517 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Mir6960-201ENSMUST00000183449 61 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm43624-201ENSMUST00000197368 180 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm24292-201ENSMUST00000082888 107 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm26206-201ENSMUST00000082908 110 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm24268-201ENSMUST00000082990 110 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim9Q8C7M3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm23424-201ENSMUST00000103889 110 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm12261-201ENSMUST00000117499 645 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm11386-201ENSMUST00000117761 347 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm11718-201ENSMUST00000119942 537 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm12515-201ENSMUST00000120116 361 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm24836-201ENSMUST00000122609 108 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm7241-201ENSMUST00000159853 357 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm21960-201ENSMUST00000181924 452 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm28141-201ENSMUST00000186676 342 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm17951-201ENSMUST00000198536 496 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm31931-201ENSMUST00000219666 222 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm7753-201ENSMUST00000221007 867 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm25200-201ENSMUST00000083094 130 ntBASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim9Q8C7M3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim9Q8C7M3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms