Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.56
Col18a1P39061 Gm12087-201ENSMUST00000121878 258 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gm22537-201ENSMUST00000158172 199 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gm25860-201ENSMUST00000158252 126 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gm24818-201ENSMUST00000175093 161 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gm6625-201ENSMUST00000177870 272 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gm28995-201ENSMUST00000186625 261 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gm46996-201ENSMUST00000220924 408 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.34□□□□□ -1.56
Col18a1P39061 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Col18a1P39061 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
Col18a1P39061 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.34□□□□□ -1.56
Col18a1P39061 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col18a1P39061 AC154386.1-201ENSMUST00000222753 2871 ntBASIC5.34□□□□□ -1.56
Col18a1P39061 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
Col18a1P39061 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Col18a1P39061 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Col18a1P39061 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Col18a1P39061 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Col18a1P39061 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 Gm24014-201ENSMUST00000157728 157 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Gm25335-201ENSMUST00000158043 103 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 Mir6541-201ENSMUST00000183649 110 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.33□□□□□ -1.56
Col18a1P39061 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.33□□□□□ -1.56
Col18a1P39061 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.33□□□□□ -1.56
Col18a1P39061 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.33□□□□□ -1.56
Col18a1P39061 Gm8785-201ENSMUST00000220259 487 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.33□□□□□ -1.56
Col18a1P39061 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Col18a1P39061 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col18a1P39061 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm13386-201ENSMUST00000117677 124 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm15452-201ENSMUST00000119877 240 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm25718-201ENSMUST00000158632 118 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm17054-201ENSMUST00000169811 259 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Mir7081-201ENSMUST00000184490 75 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm28830-201ENSMUST00000188192 213 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm18340-201ENSMUST00000196342 609 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 AC142499.1-201ENSMUST00000220036 374 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm26056-201ENSMUST00000083043 104 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col18a1P39061 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col18a1P39061 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm26273-201ENSMUST00000104180 131 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm23746-201ENSMUST00000104229 125 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm14050-201ENSMUST00000117052 346 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm25598-201ENSMUST00000179031 107 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm37743-201ENSMUST00000194645 376 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm43541-201ENSMUST00000197208 581 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm43415-201ENSMUST00000201934 750 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col18a1P39061 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col18a1P39061 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col18a1P39061 Mir202-201ENSMUST00000083568 72 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm25859-201ENSMUST00000083710 91 ntBASIC5.32□□□□□ -1.56
Col18a1P39061 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.31□□□□□ -1.56
Col18a1P39061 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.31□□□□□ -1.56
Col18a1P39061 Gm27047-201ENSMUST00000183072 1819 ntBASIC5.31□□□□□ -1.56
Col18a1P39061 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 159.5 ms