Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Col18a1P39061 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Col18a1P39061 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm14385-201ENSMUST00000116315 876 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm11936-201ENSMUST00000118323 160 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm13787-201ENSMUST00000120422 168 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm25325-201ENSMUST00000122559 86 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm17966-201ENSMUST00000193453 594 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm37030-201ENSMUST00000194254 295 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm18213-201ENSMUST00000207850 178 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm10222-201ENSMUST00000088336 294 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col18a1P39061 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Col18a1P39061 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col18a1P39061 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col18a1P39061 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col18a1P39061 Gm23747-201ENSMUST00000104228 131 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm3835-201ENSMUST00000120752 403 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm23326-201ENSMUST00000157419 105 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.36□□□□□ -1.55
Col18a1P39061 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.36□□□□□ -1.55
Col18a1P39061 Gm43586-201ENSMUST00000195948 310 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm42458-201ENSMUST00000201914 369 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm44161-201ENSMUST00000203532 253 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
Col18a1P39061 Gm45162-201ENSMUST00000209013 618 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.36□□□□□ -1.55
Col18a1P39061 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 AC129017.1-201ENSMUST00000228363 270 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm9765-201ENSMUST00000043170 321 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col18a1P39061 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col18a1P39061 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col18a1P39061 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.36□□□□□ -1.55
Col18a1P39061 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col18a1P39061 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col18a1P39061 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col18a1P39061 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col18a1P39061 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col18a1P39061 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col18a1P39061 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC5.35□□□□□ -1.55
Col18a1P39061 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col18a1P39061 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col18a1P39061 Mir466h-201ENSMUST00000104748 81 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Col18a1P39061 Gm13076-201ENSMUST00000118041 204 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Gm6664-201ENSMUST00000119138 468 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Gm15106-201ENSMUST00000119691 821 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Gm14980-201ENSMUST00000121247 736 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Gm16038-201ENSMUST00000159317 193 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Gm8041-201ENSMUST00000199755 616 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Gm44859-201ENSMUST00000207831 94 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Gm23628-201ENSMUST00000082464 173 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col18a1P39061 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col18a1P39061 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col18a1P39061 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col18a1P39061 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.35□□□□□ -1.55
Col18a1P39061 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col18a1P39061 Gm9427-201ENSMUST00000116187 651 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gm13478-201ENSMUST00000118312 413 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gm12512-201ENSMUST00000119620 217 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gm15167-201ENSMUST00000121997 187 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gm3757-201ENSMUST00000125878 675 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gm26373-201ENSMUST00000157833 103 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gm27579-201ENSMUST00000158113 63 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Gm23568-201ENSMUST00000177960 92 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col18a1P39061 Gm24829-201ENSMUST00000179245 92 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.34□□□□□ -1.55
Col18a1P39061 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 AC153141.1-201ENSMUST00000218636 501 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col18a1P39061 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col18a1P39061 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col18a1P39061 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col18a1P39061 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.34□□□□□ -1.55
Col18a1P39061 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 156.5 ms