Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm43834-201ENSMUST00000197097 4830 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm13439-201ENSMUST00000117541 409 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm13532-201ENSMUST00000120373 240 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm27864-201ENSMUST00000183704 190 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm43476-201ENSMUST00000197873 405 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm18327-201ENSMUST00000202426 830 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Gm45878-201ENSMUST00000211839 241 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 AC142113.2-201ENSMUST00000217425 748 ntBASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col4a4Q9QZR9 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm4732-201ENSMUST00000118778 473 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm16017-201ENSMUST00000119834 208 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm23889-201ENSMUST00000122689 104 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm28500-201ENSMUST00000190286 151 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm45078-201ENSMUST00000205343 546 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm3690-201ENSMUST00000211341 262 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm8274-201ENSMUST00000219820 463 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Gm42927-201ENSMUST00000200624 3841 ntBASIC2.75□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm23950-201ENSMUST00000104026 129 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm16471-201ENSMUST00000121940 618 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm22803-201ENSMUST00000158049 283 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Snord93-201ENSMUST00000175580 71 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm26622-201ENSMUST00000180520 298 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm26933-201ENSMUST00000182320 827 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm28057-201ENSMUST00000186603 615 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm21742-201ENSMUST00000189352 548 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm29366-201ENSMUST00000190481 699 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm18193-201ENSMUST00000210017 772 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 AC151902.1-201ENSMUST00000227800 375 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col4a4Q9QZR9 Gm43662-201ENSMUST00000198310 2271 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm7195-201ENSMUST00000190869 1707 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm23957-201ENSMUST00000157209 90 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm24532-201ENSMUST00000157951 286 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm24111-201ENSMUST00000175491 97 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm28011-201ENSMUST00000184097 175 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Mir7017-201ENSMUST00000184894 62 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm9696-202ENSMUST00000191541 830 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm37989-201ENSMUST00000195202 803 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm9818-201ENSMUST00000050900 255 ntBASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col4a4Q9QZR9 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 145.5 ms