Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm42758-201ENSMUST00000202146 283 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PrkdcP97313 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC1.77□□□□□ -2.13
PrkdcP97313 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm7957-201ENSMUST00000207404 2602 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm28627-201ENSMUST00000186141 453 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm43083-201ENSMUST00000199594 476 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm45654-201ENSMUST00000210980 123 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PrkdcP97313 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm15302-201ENSMUST00000117779 2630 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm19074-201ENSMUST00000218915 1429 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm8935-201ENSMUST00000066794 2798 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm12387-201ENSMUST00000118573 955 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm12849-201ENSMUST00000120013 739 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm8121-201ENSMUST00000153583 499 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm18486-201ENSMUST00000184040 298 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 AC117656.3-205ENSMUST00000224606 1205 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PrkdcP97313 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 AC126673.3-201ENSMUST00000223414 3829 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PrkdcP97313 Gm26080-201ENSMUST00000104069 131 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm26396-201ENSMUST00000104093 132 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm18595-201ENSMUST00000175736 1068 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm37579-201ENSMUST00000194291 142 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm44376-201ENSMUST00000197570 128 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 AC159242.1-201ENSMUST00000225832 194 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Snord14e-201ENSMUST00000082857 90 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm43879-201ENSMUST00000203811 3760 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PrkdcP97313 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Gm25456-201ENSMUST00000157952 109 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PrkdcP97313 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PrkdcP97313 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Gm23714-201ENSMUST00000179259 105 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PrkdcP97313 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Gm37788-201ENSMUST00000193958 2705 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PrkdcP97313 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PrkdcP97313 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PrkdcP97313 Gm23957-201ENSMUST00000157209 90 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm21489-201ENSMUST00000189668 818 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm44343-201ENSMUST00000196702 90 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 AC166323.1-201ENSMUST00000217756 367 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PrkdcP97313 AC134420.1-201ENSMUST00000227027 289 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 AC131029.2-202ENSMUST00000228430 496 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.76□□□□□ -2.13
PrkdcP97313 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
PrkdcP97313 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
PrkdcP97313 Gm24273-201ENSMUST00000102332 164 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Gm25832-201ENSMUST00000104140 130 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PrkdcP97313 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PrkdcP97313 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
PrkdcP97313 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Gm17929-201ENSMUST00000186851 627 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Gm28534-201ENSMUST00000187744 676 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PrkdcP97313 Gm25581-201ENSMUST00000083410 164 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PrkdcP97313 Gm21379-201ENSMUST00000179772 1955 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 BC022960-201ENSMUST00000119987 1815 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC1.75□□□□□ -2.13
PrkdcP97313 Gm26024-201ENSMUST00000158657 322 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Gm7214-201ENSMUST00000222428 272 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Gm26458-201ENSMUST00000082832 128 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PrkdcP97313 Gm14912-201ENSMUST00000120166 1773 ntBASIC1.75□□□□□ -2.13
PrkdcP97313 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PrkdcP97313 Gm42445-201ENSMUST00000196996 2893 ntBASIC1.74□□□□□ -2.13
PrkdcP97313 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PrkdcP97313 Gm17159-201ENSMUST00000169043 482 ntBASIC1.74□□□□□ -2.13
PrkdcP97313 Gm3852-201ENSMUST00000182781 264 ntBASIC1.74□□□□□ -2.13
PrkdcP97313 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC1.74□□□□□ -2.13
PrkdcP97313 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 154.4 ms