Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.4□□□□□ -1.55
Col18a1P39061 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.4□□□□□ -1.55
Col18a1P39061 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.4□□□□□ -1.55
Col18a1P39061 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm23754-201ENSMUST00000157576 63 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm21978-201ENSMUST00000179696 377 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm27161-201ENSMUST00000183960 562 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm43976-201ENSMUST00000203637 235 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm17991-201ENSMUST00000208139 297 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col18a1P39061 Gm25480-201ENSMUST00000083217 133 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm10161-201ENSMUST00000091506 204 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col18a1P39061 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC5.39□□□□□ -1.55
Col18a1P39061 Gm11971-201ENSMUST00000117715 288 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm22208-201ENSMUST00000122658 110 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col18a1P39061 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 Gm44938-201ENSMUST00000208614 427 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm7368-201ENSMUST00000213307 367 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Gm22365-201ENSMUST00000093750 117 ntBASIC5.39□□□□□ -1.55
Col18a1P39061 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col18a1P39061 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col18a1P39061 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col18a1P39061 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col18a1P39061 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col18a1P39061 Mir467h-201ENSMUST00000116759 121 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Gm12782-201ENSMUST00000117519 727 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.38□□□□□ -1.55
Col18a1P39061 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC5.38□□□□□ -1.55
Col18a1P39061 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.38□□□□□ -1.55
Col18a1P39061 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Gm37418-201ENSMUST00000195031 274 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Gm42805-201ENSMUST00000196158 276 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Gm42665-201ENSMUST00000202100 586 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Gm43026-201ENSMUST00000202972 325 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Gm44059-201ENSMUST00000204048 351 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Col18a1P39061 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.38□□□□□ -1.55
Col18a1P39061 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC5.38□□□□□ -1.55
Col18a1P39061 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Col18a1P39061 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col18a1P39061 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.38□□□□□ -1.55
Col18a1P39061 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col18a1P39061 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col18a1P39061 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col18a1P39061 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm26396-201ENSMUST00000104093 132 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm6587-201ENSMUST00000120219 613 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm14392-201ENSMUST00000120332 401 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm15223-201ENSMUST00000120989 826 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm25438-201ENSMUST00000158281 110 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm17528-201ENSMUST00000171026 239 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm17946-201ENSMUST00000186856 538 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm38008-201ENSMUST00000195333 518 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm36776-201ENSMUST00000207006 203 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Gm45366-201ENSMUST00000209828 384 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.37□□□□□ -1.55
Col18a1P39061 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm25800-201ENSMUST00000082636 134 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Gm43883-201ENSMUST00000204002 3750 ntBASIC5.37□□□□□ -1.55
Col18a1P39061 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col18a1P39061 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms