Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm14366-201ENSMUST00000121970 730 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm12368-201ENSMUST00000122251 434 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm25386-201ENSMUST00000157814 288 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm25706-201ENSMUST00000157828 247 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm25555-201ENSMUST00000158078 111 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Cfap61-214ENSMUST00000167179 183 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Mir3112-201ENSMUST00000175431 82 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm22584-201ENSMUST00000177935 92 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm28785-201ENSMUST00000187478 379 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm43043-201ENSMUST00000196579 412 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm42666-201ENSMUST00000201954 152 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm8820-201ENSMUST00000204077 571 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Mir34b-201ENSMUST00000083558 84 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm25859-201ENSMUST00000083710 91 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm25008-201ENSMUST00000083809 81 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Brf1Q8CFK2 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm25088-201ENSMUST00000101803 79 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Snord66-201ENSMUST00000104051 75 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm14159-201ENSMUST00000119832 451 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm23198-201ENSMUST00000158811 91 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm25999-201ENSMUST00000175398 133 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Mir6943-201ENSMUST00000185186 66 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm8392-201ENSMUST00000185647 835 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm29556-201ENSMUST00000187591 696 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm36984-201ENSMUST00000192770 235 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm38041-201ENSMUST00000194445 661 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm17951-201ENSMUST00000198536 496 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm44371-201ENSMUST00000204148 467 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm45200-201ENSMUST00000207434 919 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 mt-Tr-201ENSMUST00000082412 68 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Brf1Q8CFK2 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm4736-201ENSMUST00000100870 380 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm9003-201ENSMUST00000121810 482 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm22514-201ENSMUST00000122547 308 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm25365-201ENSMUST00000158852 121 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm16490-201ENSMUST00000165299 351 ntBASIC4.8□□□□□ -1.64
Brf1Q8CFK2 Gm17060-201ENSMUST00000172394 824 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 233 ms