Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm23627-201ENSMUST00000082459 107 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm22502-201ENSMUST00000082488 107 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm24149-201ENSMUST00000082757 107 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Mir134-201ENSMUST00000083492 71 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rnft1Q9DCN7 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.4□□□□□ -1.7
Rnft1Q9DCN7 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.4□□□□□ -1.7
Rnft1Q9DCN7 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Rnft1Q9DCN7 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rnft1Q9DCN7 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Rnft1Q9DCN7 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rnft1Q9DCN7 Gm25088-201ENSMUST00000101803 79 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm11408-201ENSMUST00000117889 519 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm16345-201ENSMUST00000146065 158 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm26153-201ENSMUST00000157433 127 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm24751-201ENSMUST00000157844 102 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm23579-201ENSMUST00000158528 103 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm25365-201ENSMUST00000158852 121 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm16318-201ENSMUST00000162402 601 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm17153-201ENSMUST00000171314 490 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm43586-201ENSMUST00000195948 310 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm44161-201ENSMUST00000203532 253 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm45232-201ENSMUST00000207811 162 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm45023-201ENSMUST00000207951 379 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm8423-201ENSMUST00000211387 607 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Rnft1Q9DCN7 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm10552-201ENSMUST00000113396 372 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm14304-201ENSMUST00000117272 446 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm11673-201ENSMUST00000117846 331 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm12379-201ENSMUST00000119607 391 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm14736-201ENSMUST00000121470 336 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm10059-201ENSMUST00000131139 171 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm23537-201ENSMUST00000157536 330 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm24689-201ENSMUST00000157760 104 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm25923-201ENSMUST00000158312 138 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm22765-201ENSMUST00000158371 128 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm3030-201ENSMUST00000163410 516 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm21978-201ENSMUST00000179696 377 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm26556-201ENSMUST00000180645 320 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm26988-201ENSMUST00000183296 945 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm28061-201ENSMUST00000189085 807 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm28408-201ENSMUST00000191557 463 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm18036-201ENSMUST00000195256 272 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm43828-201ENSMUST00000196890 639 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm42828-201ENSMUST00000199669 469 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm42758-201ENSMUST00000202146 283 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm44543-201ENSMUST00000209136 396 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm18120-201ENSMUST00000220079 511 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Gm24031-201ENSMUST00000083930 131 ntBASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rnft1Q9DCN7 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 153.5 ms