Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC152946.2-201ENSMUST00000219071 337 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PrkdcP97313 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PrkdcP97313 Snora33-201ENSMUST00000093556 129 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PrkdcP97313 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
PrkdcP97313 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm24436-201ENSMUST00000157889 302 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm18604-201ENSMUST00000172535 558 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm24757-201ENSMUST00000176987 371 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm8649-201ENSMUST00000181799 233 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.85□□□□□ -2.11
PrkdcP97313 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
PrkdcP97313 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
PrkdcP97313 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PrkdcP97313 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
PrkdcP97313 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PrkdcP97313 Gm15844-201ENSMUST00000118016 576 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PrkdcP97313 Gm25460-201ENSMUST00000157954 127 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm26928-201ENSMUST00000182674 572 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PrkdcP97313 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
PrkdcP97313 AC124561.2-201ENSMUST00000226657 1973 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PrkdcP97313 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC1.85□□□□□ -2.11
PrkdcP97313 Gm15399-201ENSMUST00000118055 724 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm12213-201ENSMUST00000119924 353 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC1.85□□□□□ -2.11
PrkdcP97313 Gm24876-201ENSMUST00000158780 92 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC1.85□□□□□ -2.11
PrkdcP97313 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
PrkdcP97313 Gm6649-201ENSMUST00000199743 1165 ntBASIC1.85□□□□□ -2.11
PrkdcP97313 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PrkdcP97313 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PrkdcP97313 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
PrkdcP97313 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PrkdcP97313 Gm25068-201ENSMUST00000103895 110 ntBASIC1.84□□□□□ -2.11
PrkdcP97313 Gm12871-201ENSMUST00000118758 438 ntBASIC1.84□□□□□ -2.11
PrkdcP97313 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC1.84□□□□□ -2.11
PrkdcP97313 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 Gm21006-201ENSMUST00000196930 667 ntBASIC1.84□□□□□ -2.11
PrkdcP97313 Gm43587-201ENSMUST00000199590 204 ntBASIC1.84□□□□□ -2.11
PrkdcP97313 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.84□□□□□ -2.11
PrkdcP97313 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
PrkdcP97313 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
PrkdcP97313 Gm13155-201ENSMUST00000119277 646 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Gm8178-201ENSMUST00000121570 646 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Gm25488-201ENSMUST00000158728 118 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Gm1833-201ENSMUST00000191608 682 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Gm37470-201ENSMUST00000193378 2798 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Gm43892-201ENSMUST00000204373 265 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
PrkdcP97313 Gm10242-201ENSMUST00000090064 330 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Mir127-201ENSMUST00000093568 70 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Gm43256-201ENSMUST00000199995 3091 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
PrkdcP97313 Gm45033-201ENSMUST00000206710 3167 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
PrkdcP97313 Gm22149-201ENSMUST00000104442 136 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Gm15162-201ENSMUST00000119325 283 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 AC147615.1-201ENSMUST00000218914 441 ntBASIC1.84□□□□□ -2.12
PrkdcP97313 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PrkdcP97313 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm13588-201ENSMUST00000120026 135 ntBASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm6245-201ENSMUST00000164699 768 ntBASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.83□□□□□ -2.12
PrkdcP97313 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm28920-201ENSMUST00000189957 699 ntBASIC1.83□□□□□ -2.12
PrkdcP97313 Mir497-201ENSMUST00000200557 84 ntBASIC1.83□□□□□ -2.12
PrkdcP97313 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm18453-201ENSMUST00000208000 626 ntBASIC1.83□□□□□ -2.12
PrkdcP97313 AC138401.2-201ENSMUST00000220461 365 ntBASIC1.83□□□□□ -2.12
PrkdcP97313 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
PrkdcP97313 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
PrkdcP97313 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PrkdcP97313 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PrkdcP97313 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms