Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm14517-201ENSMUST00000119040 337 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm15026-201ENSMUST00000119219 458 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm14804-201ENSMUST00000122322 508 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm23602-201ENSMUST00000157258 132 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm24008-201ENSMUST00000157733 138 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm28069-201ENSMUST00000189926 214 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm6510-201ENSMUST00000195916 574 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm46146-201ENSMUST00000217483 346 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm23510-201ENSMUST00000083083 163 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col18a1P39061 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm37204-201ENSMUST00000192389 3961 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col18a1P39061 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col18a1P39061 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 AC121598.3-201ENSMUST00000227179 1643 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 n-R5s219-201ENSMUST00000104328 132 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm11719-201ENSMUST00000119399 351 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm6265-201ENSMUST00000149263 231 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm22601-201ENSMUST00000157595 250 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm25425-201ENSMUST00000157611 96 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm25163-201ENSMUST00000158905 104 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm24863-201ENSMUST00000179499 107 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm27402-201ENSMUST00000183890 120 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm36247-201ENSMUST00000211834 285 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm22169-201ENSMUST00000083229 107 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col18a1P39061 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col18a1P39061 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col18a1P39061 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col18a1P39061 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col18a1P39061 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Gm23473-201ENSMUST00000158883 116 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gm8292-201ENSMUST00000162574 396 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gm6245-201ENSMUST00000164699 768 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Gm20794-201ENSMUST00000177626 628 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gm26607-201ENSMUST00000180661 867 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gm19202-201ENSMUST00000198096 808 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gm45150-201ENSMUST00000206051 467 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.51□□□□□ -1.53
Col18a1P39061 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col18a1P39061 Gm22997-201ENSMUST00000082845 107 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.51□□□□□ -1.53
Col18a1P39061 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col18a1P39061 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.51□□□□□ -1.53
Col18a1P39061 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col18a1P39061 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col18a1P39061 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.5□□□□□ -1.53
Col18a1P39061 Gm22840-201ENSMUST00000158444 136 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm25447-201ENSMUST00000158997 128 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col18a1P39061 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col18a1P39061 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Col18a1P39061 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col18a1P39061 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm43028-201ENSMUST00000202561 481 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm45080-201ENSMUST00000206648 283 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm19196-201ENSMUST00000209258 357 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Col18a1P39061 Gm2436-201ENSMUST00000219562 774 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.5□□□□□ -1.53
Col18a1P39061 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.5□□□□□ -1.53
Col18a1P39061 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 226 ms