Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC1.94□□□□□ -2.1
PrkdcP97313 Gm11866-201ENSMUST00000120209 335 ntBASIC1.94□□□□□ -2.1
PrkdcP97313 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC1.94□□□□□ -2.1
PrkdcP97313 Gm45312-201ENSMUST00000210566 311 ntBASIC1.94□□□□□ -2.1
PrkdcP97313 Gm6796-201ENSMUST00000211919 243 ntBASIC1.94□□□□□ -2.1
PrkdcP97313 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PrkdcP97313 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
PrkdcP97313 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
PrkdcP97313 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC1.94□□□□□ -2.1
PrkdcP97313 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
PrkdcP97313 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PrkdcP97313 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PrkdcP97313 Gm23268-201ENSMUST00000175494 78 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC1.93□□□□□ -2.1
PrkdcP97313 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
PrkdcP97313 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Gm2033-201ENSMUST00000210753 2287 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Gm11285-201ENSMUST00000118443 322 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Gm37807-201ENSMUST00000194310 190 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Gm44887-201ENSMUST00000208980 178 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 AC154600.1-201ENSMUST00000226480 714 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Gm45395-201ENSMUST00000209891 559 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PrkdcP97313 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PrkdcP97313 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC1.93□□□□□ -2.1
PrkdcP97313 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.93□□□□□ -2.1
PrkdcP97313 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PrkdcP97313 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PrkdcP97313 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Gm44846-201ENSMUST00000207127 3243 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PrkdcP97313 Mir682-201ENSMUST00000102281 96 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm6444-201ENSMUST00000119611 458 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm25048-201ENSMUST00000158598 91 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm19253-201ENSMUST00000204279 307 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm44694-201ENSMUST00000205317 1298 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm44609-201ENSMUST00000207157 460 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 AC134596.2-201ENSMUST00000222158 171 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
PrkdcP97313 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
PrkdcP97313 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PrkdcP97313 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PrkdcP97313 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
PrkdcP97313 Gm37751-201ENSMUST00000192440 1198 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm18985-201ENSMUST00000196472 1079 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm43746-201ENSMUST00000200028 317 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 AC144819.1-201ENSMUST00000227015 620 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PrkdcP97313 Gm7135-202ENSMUST00000191257 1905 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Mir669d-201ENSMUST00000104644 121 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm23213-201ENSMUST00000122715 313 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm7592-201ENSMUST00000160674 627 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Snord93-201ENSMUST00000175580 71 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm8807-201ENSMUST00000179328 492 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm29602-201ENSMUST00000186887 442 ntBASIC1.92□□□□□ -2.1
PrkdcP97313 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC1.92□□□□□ -2.1
PrkdcP97313 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm20342-201ENSMUST00000185480 9720 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm16327-201ENSMUST00000137146 228 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Snora31-201ENSMUST00000083213 130 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm23325-201ENSMUST00000157422 129 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Gm17711-201ENSMUST00000172028 237 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC1.91□□□□□ -2.1
PrkdcP97313 CT030161.1-201ENSMUST00000218411 124 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Vaultrc5-201ENSMUST00000083211 143 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PrkdcP97313 Gm25500-201ENSMUST00000104426 123 ntBASIC1.91□□□□□ -2.1
PrkdcP97313 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC1.91□□□□□ -2.1
PrkdcP97313 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PrkdcP97313 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PrkdcP97313 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms