Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col18a1P39061 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm14506-201ENSMUST00000121165 536 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm12276-201ENSMUST00000121709 301 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm12412-201ENSMUST00000121867 328 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.55□□□□□ -1.52
Col18a1P39061 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.55□□□□□ -1.52
Col18a1P39061 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.55□□□□□ -1.52
Col18a1P39061 Gm19908-201ENSMUST00000204684 391 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm44879-201ENSMUST00000207007 503 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.55□□□□□ -1.52
Col18a1P39061 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.55□□□□□ -1.52
Col18a1P39061 Gm24490-201ENSMUST00000083803 98 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col18a1P39061 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.55□□□□□ -1.52
Col18a1P39061 Gm26271-201ENSMUST00000158349 104 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm22531-201ENSMUST00000158819 140 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.55□□□□□ -1.52
Col18a1P39061 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Trbv12-3-201ENSMUST00000192675 372 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm44972-201ENSMUST00000206419 406 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Gm7808-201ENSMUST00000082002 387 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm24316-201ENSMUST00000083041 107 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Mir34b-201ENSMUST00000083558 84 ntBASIC5.55□□□□□ -1.52
Col18a1P39061 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col18a1P39061 BC055308-201ENSMUST00000193380 2538 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC5.54□□□□□ -1.52
Col18a1P39061 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col18a1P39061 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col18a1P39061 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col18a1P39061 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col18a1P39061 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col18a1P39061 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col18a1P39061 Mir292-201ENSMUST00000104847 82 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Gm12878-201ENSMUST00000118744 332 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Gm23864-201ENSMUST00000177607 107 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Gm25939-201ENSMUST00000179876 191 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Mir7014-201ENSMUST00000183853 63 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Col18a1P39061 Gm35876-201ENSMUST00000205044 459 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Gm44611-201ENSMUST00000207507 355 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Gm39197-201ENSMUST00000212069 457 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 AC140785.1-201ENSMUST00000217782 383 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Gm20304-201ENSMUST00000218168 444 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Gm12582-201ENSMUST00000030555 697 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col18a1P39061 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Col18a1P39061 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col18a1P39061 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.54□□□□□ -1.52
Col18a1P39061 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.53□□□□□ -1.52
Col18a1P39061 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col18a1P39061 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm12691-201ENSMUST00000120186 456 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.53□□□□□ -1.52
Col18a1P39061 Gm17030-201ENSMUST00000167016 393 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm9587-201ENSMUST00000172449 454 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm28141-201ENSMUST00000186676 342 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm42465-201ENSMUST00000197036 492 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col18a1P39061 Gm45614-201ENSMUST00000209994 721 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.53□□□□□ -1.52
Col18a1P39061 Gm46994-201ENSMUST00000221523 219 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm26225-201ENSMUST00000082508 135 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Gm22444-201ENSMUST00000093693 108 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col18a1P39061 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col18a1P39061 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Col18a1P39061 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col18a1P39061 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col18a1P39061 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.53□□□□□ -1.52
Col18a1P39061 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col18a1P39061 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col18a1P39061 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.53□□□□□ -1.52
Col18a1P39061 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col18a1P39061 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Col18a1P39061 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col18a1P39061 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col18a1P39061 Gm12245-201ENSMUST00000117266 357 ntBASIC5.52□□□□□ -1.53
Col18a1P39061 Gm14794-201ENSMUST00000118181 192 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 141.9 ms