Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col18a1P39061 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col18a1P39061 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col18a1P39061 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col18a1P39061 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col18a1P39061 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col18a1P39061 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col18a1P39061 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Col18a1P39061 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col18a1P39061 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Gm45884-201ENSMUST00000209540 3416 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col18a1P39061 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.57□□□□□ -1.52
Col18a1P39061 Gm14652-201ENSMUST00000118479 235 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm11645-201ENSMUST00000121589 649 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm12095-201ENSMUST00000121962 816 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm22889-201ENSMUST00000158639 58 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm24757-201ENSMUST00000176987 371 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm26866-201ENSMUST00000180414 802 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm28257-201ENSMUST00000185244 463 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC5.57□□□□□ -1.52
Col18a1P39061 Gm9722-201ENSMUST00000194568 802 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm4644-201ENSMUST00000197587 400 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm6850-201ENSMUST00000210031 530 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Col18a1P39061 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm25200-201ENSMUST00000083094 130 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Mir370-201ENSMUST00000083499 79 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Olfr575-201ENSMUST00000084812 957 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm25821-201ENSMUST00000093657 133 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col18a1P39061 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col18a1P39061 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col18a1P39061 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col18a1P39061 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col18a1P39061 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col18a1P39061 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col18a1P39061 Gm26140-201ENSMUST00000103807 110 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm23532-201ENSMUST00000104569 112 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col18a1P39061 Gm14987-201ENSMUST00000117820 676 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col18a1P39061 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.57□□□□□ -1.52
Col18a1P39061 Gm23540-201ENSMUST00000157543 164 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm23277-201ENSMUST00000157914 136 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm22733-201ENSMUST00000158094 91 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm24636-201ENSMUST00000158673 288 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm2862-201ENSMUST00000161524 328 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm16545-201ENSMUST00000161968 463 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm20648-201ENSMUST00000175815 328 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col18a1P39061 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm27160-201ENSMUST00000184837 199 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm27190-201ENSMUST00000184890 542 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm42824-201ENSMUST00000199361 247 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm18482-201ENSMUST00000202405 760 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.57□□□□□ -1.52
Col18a1P39061 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Gm3829-201ENSMUST00000222362 619 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.57□□□□□ -1.52
Col18a1P39061 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col18a1P39061 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col18a1P39061 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col18a1P39061 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Col18a1P39061 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col18a1P39061 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col18a1P39061 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Col18a1P39061 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col18a1P39061 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col18a1P39061 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Col18a1P39061 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Col18a1P39061 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Col18a1P39061 Mir290a-201ENSMUST00000104627 83 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Gm12982-201ENSMUST00000117408 190 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Gm25781-201ENSMUST00000122527 84 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col18a1P39061 Gm23198-201ENSMUST00000158811 91 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Gm33973-201ENSMUST00000195148 534 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Gm7041-201ENSMUST00000201227 524 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Gm43892-201ENSMUST00000204373 265 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Gm45375-201ENSMUST00000210338 280 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 AC141642.1-201ENSMUST00000220598 229 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.56□□□□□ -1.52
Col18a1P39061 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col18a1P39061 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col18a1P39061 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.56□□□□□ -1.52
Col18a1P39061 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.56□□□□□ -1.52
Col18a1P39061 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col18a1P39061 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col18a1P39061 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms