Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rtl1Q7M732 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Rtl1Q7M732 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
Rtl1Q7M732 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Rtl1Q7M732 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rtl1Q7M732 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Rtl1Q7M732 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC30.87■■■□□ 2.53
Rtl1Q7M732 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC30.87■■■□□ 2.53
Rtl1Q7M732 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl1Q7M732 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Gm6598-201ENSMUST00000202719 2615 ntBASIC30.86■■■□□ 2.53
Rtl1Q7M732 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rtl1Q7M732 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Gm7284-201ENSMUST00000131667 944 ntBASIC30.85■■■□□ 2.53
Rtl1Q7M732 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl1Q7M732 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rtl1Q7M732 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rtl1Q7M732 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Rtl1Q7M732 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Rtl1Q7M732 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rtl1Q7M732 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Rtl1Q7M732 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Rtl1Q7M732 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rtl1Q7M732 Gm37722-201ENSMUST00000193757 208 ntBASIC30.83■■■□□ 2.53
Rtl1Q7M732 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rtl1Q7M732 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rtl1Q7M732 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Rtl1Q7M732 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rtl1Q7M732 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC30.83■■■□□ 2.53
Rtl1Q7M732 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
Rtl1Q7M732 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rtl1Q7M732 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Rtl1Q7M732 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC30.82■■■□□ 2.52
Rtl1Q7M732 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC30.82■■■□□ 2.52
Rtl1Q7M732 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Rtl1Q7M732 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
Rtl1Q7M732 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rtl1Q7M732 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC30.81■■■□□ 2.52
Rtl1Q7M732 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rtl1Q7M732 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rtl1Q7M732 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Rtl1Q7M732 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rtl1Q7M732 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC30.81■■■□□ 2.52
Rtl1Q7M732 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Rtl1Q7M732 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Rtl1Q7M732 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Rtl1Q7M732 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
Rtl1Q7M732 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC30.8■■■□□ 2.52
Rtl1Q7M732 Gm11860-201ENSMUST00000122346 1010 ntBASIC30.8■■■□□ 2.52
Rtl1Q7M732 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC30.8■■■□□ 2.52
Rtl1Q7M732 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
Rtl1Q7M732 Gm27000-201ENSMUST00000182943 842 ntBASIC30.8■■■□□ 2.52
Rtl1Q7M732 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
Rtl1Q7M732 AC154855.1-201ENSMUST00000227353 1458 ntBASIC30.8■■■□□ 2.52
Rtl1Q7M732 Gm27389-201ENSMUST00000183622 195 ntBASIC30.79■■■□□ 2.52
Rtl1Q7M732 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Rtl1Q7M732 Cxcl14-202ENSMUST00000224801 1467 ntBASIC30.78■■■□□ 2.52
Rtl1Q7M732 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl1Q7M732 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms