Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.77■□□□□ 0.92
Mre11Q61216 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.77■□□□□ 0.92
Mre11Q61216 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mre11Q61216 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Mre11Q61216 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Mre11Q61216 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Mre11Q61216 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Mre11Q61216 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Mre11Q61216 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Mre11Q61216 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Mre11Q61216 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.76■□□□□ 0.91
Mre11Q61216 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.76■□□□□ 0.91
Mre11Q61216 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.76■□□□□ 0.91
Mre11Q61216 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.76■□□□□ 0.91
Mre11Q61216 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Mre11Q61216 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mre11Q61216 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Mre11Q61216 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Mre11Q61216 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Mre11Q61216 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mre11Q61216 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.75■□□□□ 0.91
Mre11Q61216 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.75■□□□□ 0.91
Mre11Q61216 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mre11Q61216 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mre11Q61216 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mre11Q61216 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.74■□□□□ 0.91
Mre11Q61216 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Mre11Q61216 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.74■□□□□ 0.91
Mre11Q61216 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mre11Q61216 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Mre11Q61216 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Mre11Q61216 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Mre11Q61216 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.73■□□□□ 0.91
Mre11Q61216 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.73■□□□□ 0.91
Mre11Q61216 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Mre11Q61216 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.73■□□□□ 0.91
Mre11Q61216 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.73■□□□□ 0.91
Mre11Q61216 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mre11Q61216 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mre11Q61216 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.72■□□□□ 0.91
Mre11Q61216 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms