Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm18101-201ENSMUST00000215769 548 ntBASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
4933424G06RikA0A140LIP3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
4933424G06RikA0A140LIP3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
4933424G06RikA0A140LIP3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
4933424G06RikA0A140LIP3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
4933424G06RikA0A140LIP3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
4933424G06RikA0A140LIP3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
4933424G06RikA0A140LIP3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
4933424G06RikA0A140LIP3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
4933424G06RikA0A140LIP3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms