Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col18a1P39061 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col18a1P39061 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm27964-201ENSMUST00000185195 62 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm37746-201ENSMUST00000193249 198 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm43043-201ENSMUST00000196579 412 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm43669-201ENSMUST00000198229 436 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col18a1P39061 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col18a1P39061 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col18a1P39061 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col18a1P39061 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col18a1P39061 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col18a1P39061 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col18a1P39061 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Gm7618-201ENSMUST00000121643 171 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm9785-202ENSMUST00000144563 593 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm25714-201ENSMUST00000158626 296 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm29231-201ENSMUST00000179850 319 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm27957-201ENSMUST00000184054 127 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Mir3970-201ENSMUST00000199287 90 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 Gm44513-201ENSMUST00000206811 439 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm4528-201ENSMUST00000207905 551 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.6□□□□□ -1.51
Col18a1P39061 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col18a1P39061 Svet1-201ENSMUST00000209370 3940 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm37320-201ENSMUST00000192781 4953 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col18a1P39061 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col18a1P39061 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm42770-201ENSMUST00000199657 4155 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm11943-201ENSMUST00000119473 327 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm11403-201ENSMUST00000122195 369 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm25105-201ENSMUST00000122477 130 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm23496-201ENSMUST00000157741 248 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm4479-201ENSMUST00000178807 171 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm26746-201ENSMUST00000181722 487 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm27522-201ENSMUST00000183949 230 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm20561-201ENSMUST00000188131 292 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm44481-201ENSMUST00000197288 84 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm44339-201ENSMUST00000200598 84 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm2446-201ENSMUST00000220144 772 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Gm4052-201ENSMUST00000220890 451 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 AC144628.2-201ENSMUST00000227374 352 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col18a1P39061 Gm23406-201ENSMUST00000082537 122 ntBASIC5.59□□□□□ -1.51
Col18a1P39061 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Col18a1P39061 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col18a1P39061 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col18a1P39061 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col18a1P39061 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.58□□□□□ -1.52
Col18a1P39061 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.58□□□□□ -1.52
Col18a1P39061 Gm4736-201ENSMUST00000100870 380 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col18a1P39061 Gm24586-201ENSMUST00000116695 89 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Gm11982-201ENSMUST00000121480 314 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC5.58□□□□□ -1.52
Col18a1P39061 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.58□□□□□ -1.52
Col18a1P39061 Gm25535-201ENSMUST00000175364 125 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Mir1264-201ENSMUST00000175381 86 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Gm22348-201ENSMUST00000178674 79 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col18a1P39061 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Gm32381-201ENSMUST00000203192 476 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.58□□□□□ -1.52
Col18a1P39061 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col18a1P39061 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 184.7 ms