Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col18a1P39061 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col18a1P39061 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col18a1P39061 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col18a1P39061 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col18a1P39061 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Mir673-201ENSMUST00000102361 91 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm15312-201ENSMUST00000118827 271 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm15309-201ENSMUST00000121644 240 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm25184-201ENSMUST00000157753 163 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm22361-201ENSMUST00000158435 176 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm24315-201ENSMUST00000177835 127 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm29148-201ENSMUST00000188140 336 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm43228-201ENSMUST00000200735 264 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.62□□□□□ -1.51
Col18a1P39061 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col18a1P39061 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Col18a1P39061 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm45540-201ENSMUST00000209271 3606 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm8473-201ENSMUST00000176697 1885 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col18a1P39061 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm14973-201ENSMUST00000117248 255 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm10059-201ENSMUST00000131139 171 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Mir1934-201ENSMUST00000158127 83 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm4134-201ENSMUST00000173244 563 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm9541-201ENSMUST00000188409 502 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm38334-201ENSMUST00000195060 313 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm18011-201ENSMUST00000203717 565 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.62□□□□□ -1.51
Col18a1P39061 AC154296.2-201ENSMUST00000214696 545 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Gm8681-201ENSMUST00000219115 618 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col18a1P39061 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Col18a1P39061 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col18a1P39061 Gm38031-201ENSMUST00000191819 3015 ntBASIC5.62□□□□□ -1.51
Col18a1P39061 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Col18a1P39061 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col18a1P39061 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Col18a1P39061 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Col18a1P39061 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.61□□□□□ -1.51
Col18a1P39061 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Col18a1P39061 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
Col18a1P39061 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col18a1P39061 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col18a1P39061 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col18a1P39061 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col18a1P39061 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col18a1P39061 Gm13087-201ENSMUST00000118298 256 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm11794-201ENSMUST00000119446 237 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm14229-201ENSMUST00000121178 850 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm17149-201ENSMUST00000164712 375 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm29147-201ENSMUST00000186846 315 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm28160-201ENSMUST00000191229 315 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col18a1P39061 Gm37239-201ENSMUST00000193510 141 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.61□□□□□ -1.51
Col18a1P39061 Gm44149-201ENSMUST00000204256 226 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm44655-201ENSMUST00000207768 423 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col18a1P39061 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Gm45814-201ENSMUST00000212646 775 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 AC166343.1-201ENSMUST00000213261 577 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 AC132465.3-201ENSMUST00000219326 195 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col18a1P39061 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.61□□□□□ -1.51
Col18a1P39061 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col18a1P39061 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col18a1P39061 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.61□□□□□ -1.51
Col18a1P39061 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col18a1P39061 Gm25876-201ENSMUST00000104329 119 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm11432-201ENSMUST00000117334 231 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm12149-201ENSMUST00000117511 654 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm14885-201ENSMUST00000117969 496 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm6923-201ENSMUST00000118343 406 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Gm24737-201ENSMUST00000158861 100 ntBASIC5.6□□□□□ -1.51
Col18a1P39061 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms