Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm38098-201ENSMUST00000194115 241 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm8874-201ENSMUST00000196826 286 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm19131-201ENSMUST00000203408 789 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm45209-201ENSMUST00000207122 353 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm7380-201ENSMUST00000211599 466 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm23875-201ENSMUST00000083711 318 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm26108-201ENSMUST00000083973 191 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Brf1Q8CFK2 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Mir761-201ENSMUST00000103245 76 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm23948-201ENSMUST00000104030 132 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm11488-201ENSMUST00000117277 863 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm8666-201ENSMUST00000117517 292 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm13349-201ENSMUST00000118436 411 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm12935-201ENSMUST00000119352 246 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm23789-201ENSMUST00000122536 301 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm22345-201ENSMUST00000122644 107 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm25908-201ENSMUST00000157624 98 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm22135-201ENSMUST00000158752 108 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm5527-201ENSMUST00000179821 642 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm9320-201ENSMUST00000184151 473 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm29634-201ENSMUST00000188467 696 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm28699-201ENSMUST00000189193 696 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm18462-201ENSMUST00000208112 417 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm46994-201ENSMUST00000221523 219 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm23928-201ENSMUST00000082469 145 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.07□□□□□ -1.6
Brf1Q8CFK2 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm15951-201ENSMUST00000118377 400 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm11352-201ENSMUST00000119264 517 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm14591-201ENSMUST00000120407 518 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm14411-201ENSMUST00000121798 914 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm11692-201ENSMUST00000122121 902 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm22084-201ENSMUST00000157585 105 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm22314-201ENSMUST00000158007 281 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm20701-201ENSMUST00000176082 347 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.06□□□□□ -1.6
Brf1Q8CFK2 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Brf1Q8CFK2 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms