Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf38bQ80SY5 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.67□□□□□ -1.5
Prpf38bQ80SY5 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm14046-201ENSMUST00000119389 509 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm14008-201ENSMUST00000120483 274 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm14980-201ENSMUST00000121247 736 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm14638-201ENSMUST00000121338 216 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm12732-201ENSMUST00000121688 180 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm11507-201ENSMUST00000156462 412 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm25339-201ENSMUST00000157458 232 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm24537-201ENSMUST00000157950 102 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm22085-201ENSMUST00000158344 110 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm16125-201ENSMUST00000159003 339 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm26701-201ENSMUST00000181571 234 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm21673-201ENSMUST00000186640 436 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm21135-201ENSMUST00000189023 436 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Prpf38bQ80SY5 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm24608-201ENSMUST00000104381 136 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Mir669g-201ENSMUST00000116809 123 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm14472-201ENSMUST00000119815 282 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm16038-201ENSMUST00000159317 193 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm21978-201ENSMUST00000179696 377 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm28769-201ENSMUST00000190176 615 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm43115-201ENSMUST00000196244 160 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm44016-201ENSMUST00000203463 164 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm44059-201ENSMUST00000204048 351 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm22741-201ENSMUST00000083438 165 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Gm6043-201ENSMUST00000099961 492 ntBASIC5.65□□□□□ -1.5
Prpf38bQ80SY5 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Prpf38bQ80SY5 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Prpf38bQ80SY5 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.65□□□□□ -1.51
Prpf38bQ80SY5 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Prpf38bQ80SY5 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Prpf38bQ80SY5 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Prpf38bQ80SY5 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm15400-201ENSMUST00000118944 601 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm14831-201ENSMUST00000120253 409 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm11369-201ENSMUST00000120812 318 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm12413-201ENSMUST00000121508 312 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm11679-201ENSMUST00000121830 779 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm27855-201ENSMUST00000184122 128 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm27551-201ENSMUST00000184258 77 ntBASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Prpf38bQ80SY5 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 754.8 ms