Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm25153-201ENSMUST00000157118 156 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm16566-201ENSMUST00000160387 910 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm9587-201ENSMUST00000172449 454 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm19203-201ENSMUST00000174049 939 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm42666-201ENSMUST00000201954 152 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.1□□□□□ -2.07
PrkdcP97313 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm44869-201ENSMUST00000208836 357 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PrkdcP97313 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 AC160130.1-201ENSMUST00000220734 2735 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PrkdcP97313 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PrkdcP97313 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm12723-201ENSMUST00000120700 451 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm43804-201ENSMUST00000198280 456 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm7422-201ENSMUST00000220115 640 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 AC166358.4-201ENSMUST00000223030 105 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC2.1□□□□□ -2.07
PrkdcP97313 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm8979-201ENSMUST00000183386 7296 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm29335-201ENSMUST00000188361 459 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm37900-201ENSMUST00000195510 3805 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PrkdcP97313 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PrkdcP97313 Gm20651-201ENSMUST00000177219 329 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm43427-201ENSMUST00000198188 331 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Gm44253-201ENSMUST00000203387 628 ntBASIC2.1□□□□□ -2.07
PrkdcP97313 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PrkdcP97313 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PrkdcP97313 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PrkdcP97313 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PrkdcP97313 Gm17166-201ENSMUST00000172006 431 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PrkdcP97313 Gm2676-201ENSMUST00000207279 606 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.09□□□□□ -2.07
PrkdcP97313 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PrkdcP97313 Gm37363-201ENSMUST00000192336 2233 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PrkdcP97313 Gm13438-201ENSMUST00000120100 573 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 Gm14649-201ENSMUST00000121814 324 ntBASIC2.09□□□□□ -2.07
PrkdcP97313 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC2.09□□□□□ -2.07
PrkdcP97313 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.09□□□□□ -2.07
PrkdcP97313 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PrkdcP97313 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PrkdcP97313 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC2.09□□□□□ -2.08
PrkdcP97313 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC2.09□□□□□ -2.08
PrkdcP97313 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
PrkdcP97313 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PrkdcP97313 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
PrkdcP97313 Gm23895-201ENSMUST00000158108 160 ntBASIC2.09□□□□□ -2.08
PrkdcP97313 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PrkdcP97313 Mir5128-201ENSMUST00000175217 84 ntBASIC2.09□□□□□ -2.08
PrkdcP97313 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PrkdcP97313 Gm38088-201ENSMUST00000195829 241 ntBASIC2.09□□□□□ -2.08
PrkdcP97313 Gm43276-201ENSMUST00000199712 364 ntBASIC2.09□□□□□ -2.08
PrkdcP97313 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PrkdcP97313 Gm45452-201ENSMUST00000210905 177 ntBASIC2.09□□□□□ -2.08
PrkdcP97313 Gm35405-201ENSMUST00000218754 400 ntBASIC2.09□□□□□ -2.08
PrkdcP97313 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PrkdcP97313 Cmah-208ENSMUST00000224819 9482 ntBASIC2.09□□□□□ -2.08
PrkdcP97313 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
PrkdcP97313 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
PrkdcP97313 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PrkdcP97313 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
PrkdcP97313 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PrkdcP97313 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PrkdcP97313 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PrkdcP97313 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PrkdcP97313 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Gm18867-201ENSMUST00000198022 1179 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PrkdcP97313 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PrkdcP97313 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PrkdcP97313 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PrkdcP97313 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PrkdcP97313 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PrkdcP97313 Gm11905-201ENSMUST00000117653 678 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Gm26933-201ENSMUST00000182320 827 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Gm18330-201ENSMUST00000199246 547 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 Gm18585-201ENSMUST00000215197 556 ntBASIC2.08□□□□□ -2.08
PrkdcP97313 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms