Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm29460-201ENSMUST00000188607 714 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm43083-201ENSMUST00000199594 476 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm44389-201ENSMUST00000203795 182 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm6012-201ENSMUST00000210821 730 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col18a1P39061 Gm22749-201ENSMUST00000082490 107 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm24856-201ENSMUST00000082809 107 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm25258-201ENSMUST00000083049 107 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm24535-201ENSMUST00000083140 107 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Gm22352-201ENSMUST00000083917 107 ntBASIC5.7□□□□□ -1.5
Col18a1P39061 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col18a1P39061 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col18a1P39061 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 Gm9850-201ENSMUST00000117916 227 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm11718-201ENSMUST00000119942 537 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm12881-201ENSMUST00000121191 203 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm7855-201ENSMUST00000137737 687 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm24080-201ENSMUST00000175178 232 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col18a1P39061 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC5.69□□□□□ -1.5
Col18a1P39061 Gm27640-201ENSMUST00000184580 147 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm6057-201ENSMUST00000195927 314 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm43649-201ENSMUST00000196596 391 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Gm17887-201ENSMUST00000200194 547 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.69□□□□□ -1.5
Col18a1P39061 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 Gm19154-201ENSMUST00000223330 940 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col18a1P39061 Gm23851-201ENSMUST00000083831 103 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col18a1P39061 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.69□□□□□ -1.5
Col18a1P39061 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col18a1P39061 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Col18a1P39061 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm22073-201ENSMUST00000122668 189 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm26276-201ENSMUST00000157099 109 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm22380-201ENSMUST00000157479 95 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm26173-201ENSMUST00000158416 136 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC5.68□□□□□ -1.5
Col18a1P39061 Gm22398-201ENSMUST00000174941 125 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm25731-201ENSMUST00000175167 125 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm19932-201ENSMUST00000177033 313 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm27392-201ENSMUST00000185041 101 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.68□□□□□ -1.5
Col18a1P39061 Gm42694-201ENSMUST00000196951 358 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 AC145736.2-201ENSMUST00000216305 365 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.68□□□□□ -1.5
Col18a1P39061 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col18a1P39061 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Col18a1P39061 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Col18a1P39061 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col18a1P39061 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col18a1P39061 Gm24831-201ENSMUST00000116778 126 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm14594-201ENSMUST00000118052 537 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm14590-201ENSMUST00000118934 537 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm15981-201ENSMUST00000119196 457 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm11398-201ENSMUST00000120330 320 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 Gm25970-201ENSMUST00000157165 86 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm23350-201ENSMUST00000158429 103 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Ear-ps8-201ENSMUST00000161935 354 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Col18a1P39061 Gm14596-201ENSMUST00000180268 537 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm14595-201ENSMUST00000180335 537 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Mir6398-201ENSMUST00000184541 102 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm36259-201ENSMUST00000197340 392 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm45438-201ENSMUST00000210242 564 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm30738-201ENSMUST00000221346 502 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 146.5 ms