Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col4a4Q9QZR9 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Gm12731-201ENSMUST00000120932 268 ntBASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Gm25808-201ENSMUST00000122784 284 ntBASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Gm9379-201ENSMUST00000196790 646 ntBASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Gm20946-201ENSMUST00000212367 461 ntBASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col4a4Q9QZR9 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm22551-201ENSMUST00000157795 103 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Mir8096-201ENSMUST00000184526 127 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm29148-201ENSMUST00000188140 336 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm6230-201ENSMUST00000208077 780 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm45252-201ENSMUST00000211579 397 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm8074-201ENSMUST00000095071 252 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col4a4Q9QZR9 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm13170-201ENSMUST00000119716 643 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm23229-201ENSMUST00000157297 105 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm22099-201ENSMUST00000157925 123 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm37293-201ENSMUST00000191658 295 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm2142-201ENSMUST00000197899 589 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm650-201ENSMUST00000144428 1551 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm12568-201ENSMUST00000117362 624 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm12261-201ENSMUST00000117499 645 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm13379-201ENSMUST00000118053 621 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm13755-201ENSMUST00000118509 305 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm12387-201ENSMUST00000118573 955 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm5943-201ENSMUST00000119458 459 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm13865-201ENSMUST00000120957 865 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm22666-201ENSMUST00000158717 164 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Mir3075-201ENSMUST00000175340 85 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm5527-201ENSMUST00000179821 642 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Mir6715-201ENSMUST00000184990 57 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm21139-201ENSMUST00000186594 877 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm18867-201ENSMUST00000198022 1179 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Mir7682-201ENSMUST00000198467 58 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm18748-201ENSMUST00000198507 622 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Gm44519-201ENSMUST00000206486 122 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Col4a4Q9QZR9 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col4a4Q9QZR9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Col4a4Q9QZR9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col4a4Q9QZR9 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms