Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col18a1P39061 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col18a1P39061 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Col18a1P39061 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col18a1P39061 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm22479-201ENSMUST00000122566 81 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm16236-201ENSMUST00000159588 379 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm29045-201ENSMUST00000187278 698 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.75□□□□□ -1.49
Col18a1P39061 AC155923.1-201ENSMUST00000215676 356 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm7753-201ENSMUST00000221007 867 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col18a1P39061 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col18a1P39061 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col18a1P39061 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col18a1P39061 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col18a1P39061 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.74□□□□□ -1.49
Col18a1P39061 Gm26384-201ENSMUST00000102183 110 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col18a1P39061 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col18a1P39061 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Gm14383-201ENSMUST00000121637 386 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.74□□□□□ -1.49
Col18a1P39061 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.74□□□□□ -1.49
Col18a1P39061 Gm37601-201ENSMUST00000194922 394 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.74□□□□□ -1.49
Col18a1P39061 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col18a1P39061 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col18a1P39061 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.74□□□□□ -1.49
Col18a1P39061 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col18a1P39061 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Col18a1P39061 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm15902-202ENSMUST00000219623 3477 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm15266-201ENSMUST00000119635 255 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Gm22534-201ENSMUST00000158173 104 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm16378-201ENSMUST00000179168 342 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm44041-201ENSMUST00000203678 396 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col18a1P39061 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col18a1P39061 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.73□□□□□ -1.49
Col18a1P39061 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.73□□□□□ -1.49
Col18a1P39061 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col18a1P39061 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.73□□□□□ -1.49
Col18a1P39061 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm12803-201ENSMUST00000118907 821 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm11325-201ENSMUST00000119967 469 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm13555-201ENSMUST00000121668 319 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm24417-201ENSMUST00000178123 79 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm23619-201ENSMUST00000178411 94 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm24653-201ENSMUST00000178541 79 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm25934-201ENSMUST00000178642 79 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm25474-201ENSMUST00000179052 94 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm22047-201ENSMUST00000179176 94 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col18a1P39061 Gm27313-201ENSMUST00000183500 142 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm28390-201ENSMUST00000185212 700 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 Gm44990-201ENSMUST00000203922 217 ntBASIC5.72□□□□□ -1.49
Col18a1P39061 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms