Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm4859-201ENSMUST00000199625 787 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm6649-201ENSMUST00000199743 1165 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.26□□□□□ -1.89
Col4a4Q9QZR9 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Gm46234-201ENSMUST00000218702 259 ntBASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col4a4Q9QZR9 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm4596-201ENSMUST00000117197 442 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm14957-201ENSMUST00000121069 817 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm22885-201ENSMUST00000157410 107 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm16101-201ENSMUST00000160695 430 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm28141-201ENSMUST00000186676 342 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm44559-201ENSMUST00000207177 1012 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm7540-201ENSMUST00000219764 926 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 n-R5s205-201ENSMUST00000083149 125 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm6361-201ENSMUST00000091031 435 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm38032-201ENSMUST00000195052 1589 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm15021-201ENSMUST00000117832 742 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm24937-201ENSMUST00000122597 134 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm28118-201ENSMUST00000185957 294 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm29365-201ENSMUST00000189461 699 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 AC123064.2-201ENSMUST00000217758 193 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Gm22970-201ENSMUST00000083304 186 ntBASIC3.24□□□□□ -1.89
Col4a4Q9QZR9 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm336-201ENSMUST00000186376 1480 ntBASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col4a4Q9QZR9 Gm15074-201ENSMUST00000117603 936 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms