Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
PrkdcP97313 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PrkdcP97313 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PrkdcP97313 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PrkdcP97313 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PrkdcP97313 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PrkdcP97313 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Zfp-ps-201ENSMUST00000185025 478 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm29330-201ENSMUST00000190032 699 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm28098-201ENSMUST00000191361 699 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm6230-201ENSMUST00000208077 780 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm8074-201ENSMUST00000095071 252 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 AC147615.2-201ENSMUST00000219876 2154 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Gm5552-201ENSMUST00000197149 515 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PrkdcP97313 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC2.16□□□□□ -2.06
PrkdcP97313 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.16□□□□□ -2.06
PrkdcP97313 Gm26866-201ENSMUST00000180414 802 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Gm45006-201ENSMUST00000206078 690 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Gm45551-201ENSMUST00000211459 928 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Gm7198-201ENSMUST00000219635 1074 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PrkdcP97313 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.16□□□□□ -2.06
PrkdcP97313 Mir6715-201ENSMUST00000184990 57 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Gm46138-201ENSMUST00000215294 426 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 AC158641.1-201ENSMUST00000218933 229 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
PrkdcP97313 Gm38032-201ENSMUST00000195052 1589 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PrkdcP97313 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PrkdcP97313 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PrkdcP97313 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
PrkdcP97313 Gm13751-201ENSMUST00000120280 752 ntBASIC2.15□□□□□ -2.06
PrkdcP97313 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PrkdcP97313 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
PrkdcP97313 Gm22500-201ENSMUST00000158982 99 ntBASIC2.15□□□□□ -2.06
PrkdcP97313 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.15□□□□□ -2.06
PrkdcP97313 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.15□□□□□ -2.06
PrkdcP97313 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.15□□□□□ -2.06
PrkdcP97313 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC2.15□□□□□ -2.06
PrkdcP97313 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
PrkdcP97313 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PrkdcP97313 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC2.15□□□□□ -2.06
PrkdcP97313 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PrkdcP97313 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.15□□□□□ -2.06
PrkdcP97313 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PrkdcP97313 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PrkdcP97313 Gm16445-201ENSMUST00000120399 714 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm24053-201ENSMUST00000158620 105 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm16584-201ENSMUST00000159267 189 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Mir7026-201ENSMUST00000184384 67 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm29484-201ENSMUST00000186067 324 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
PrkdcP97313 Gm34314-201ENSMUST00000203622 367 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC2.15□□□□□ -2.07
PrkdcP97313 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PrkdcP97313 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PrkdcP97313 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PrkdcP97313 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PrkdcP97313 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
PrkdcP97313 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
PrkdcP97313 Gm25938-201ENSMUST00000104139 166 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 1060.7 ms