Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PrkdcP97313 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PrkdcP97313 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PrkdcP97313 Gm23950-201ENSMUST00000104026 129 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PrkdcP97313 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PrkdcP97313 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PrkdcP97313 Gm25863-201ENSMUST00000158249 329 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Gm28030-201ENSMUST00000184987 138 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Gm37989-201ENSMUST00000195202 803 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Gm42919-201ENSMUST00000197753 1284 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 AC154618.1-201ENSMUST00000227451 303 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Mir504-201ENSMUST00000093602 79 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Gm37504-201ENSMUST00000192537 2374 ntBASIC2.21□□□□□ -2.06
PrkdcP97313 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm16171-201ENSMUST00000118004 324 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm23121-201ENSMUST00000157653 173 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Gm16134-201ENSMUST00000161714 336 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Gm20660-201ENSMUST00000177515 289 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm36985-201ENSMUST00000195595 379 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC2.2□□□□□ -2.06
PrkdcP97313 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm25808-201ENSMUST00000122784 284 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Gm18560-201ENSMUST00000173463 1123 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Mir5123-201ENSMUST00000177794 83 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC2.2□□□□□ -2.06
PrkdcP97313 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm44542-201ENSMUST00000208677 4314 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm25280-201ENSMUST00000157269 101 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Mir6398-201ENSMUST00000184541 102 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PrkdcP97313 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm36371-201ENSMUST00000209043 1103 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PrkdcP97313 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
PrkdcP97313 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PrkdcP97313 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PrkdcP97313 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PrkdcP97313 Gm22472-201ENSMUST00000104115 134 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm24922-201ENSMUST00000158511 102 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.19□□□□□ -2.06
PrkdcP97313 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
PrkdcP97313 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
PrkdcP97313 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
PrkdcP97313 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
PrkdcP97313 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
PrkdcP97313 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm25360-201ENSMUST00000178786 191 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm25820-202ENSMUST00000197479 128 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm28362-201ENSMUST00000189430 2420 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Mir344c-201ENSMUST00000103919 92 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm15936-201ENSMUST00000118706 460 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm24402-201ENSMUST00000157873 91 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm15795-201ENSMUST00000160969 553 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.19□□□□□ -2.06
PrkdcP97313 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.19□□□□□ -2.06
PrkdcP97313 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.19□□□□□ -2.06
PrkdcP97313 Gm8274-201ENSMUST00000219820 463 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms