Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm24042-201ENSMUST00000083114 103 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Gm24764-201ENSMUST00000083686 199 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col18a1P39061 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col18a1P39061 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col18a1P39061 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col18a1P39061 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col18a1P39061 Gm6558-201ENSMUST00000191934 1973 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm23578-201ENSMUST00000103943 104 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm23271-201ENSMUST00000104052 124 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm25565-201ENSMUST00000104605 105 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm13268-201ENSMUST00000117485 433 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm25981-201ENSMUST00000157921 295 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm25846-201ENSMUST00000158013 135 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm28016-201ENSMUST00000184594 196 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm37095-201ENSMUST00000195421 205 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm42566-201ENSMUST00000197120 643 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col18a1P39061 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.81□□□□□ -1.48
Col18a1P39061 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col18a1P39061 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm22591-201ENSMUST00000104243 106 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm12102-201ENSMUST00000118251 604 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm7219-201ENSMUST00000119619 297 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm15157-201ENSMUST00000121852 702 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm15111-201ENSMUST00000122142 878 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm25839-201ENSMUST00000158921 103 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm15946-201ENSMUST00000160654 423 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm6395-201ENSMUST00000167639 691 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm42621-201ENSMUST00000198114 275 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm44465-201ENSMUST00000199536 114 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm43979-201ENSMUST00000203179 475 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm23736-201ENSMUST00000082553 75 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Col18a1P39061 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Mir759-201ENSMUST00000103254 98 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm16383-201ENSMUST00000118122 232 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm14897-201ENSMUST00000118213 207 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm23885-201ENSMUST00000122682 294 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm25384-201ENSMUST00000157807 105 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm23084-201ENSMUST00000157850 114 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm6900-201ENSMUST00000178971 342 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm3454-201ENSMUST00000185571 412 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm28560-201ENSMUST00000186091 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm28334-201ENSMUST00000186653 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm28495-201ENSMUST00000188452 315 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms