Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Gm7791-201ENSMUST00000219066 539 ntBASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rsph3bQ9DA80 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rsph3bQ9DA80 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rsph3bQ9DA80 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Gm18032-201ENSMUST00000222541 538 ntBASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rsph3bQ9DA80 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rsph3bQ9DA80 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rsph3bQ9DA80 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Gm16061-201ENSMUST00000122167 857 ntBASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Gm23634-201ENSMUST00000175071 91 ntBASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Gm37025-201ENSMUST00000195159 829 ntBASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Gm18101-201ENSMUST00000215769 548 ntBASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rsph3bQ9DA80 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 Gm22697-201ENSMUST00000175194 63 ntBASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Rsph3bQ9DA80 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms