Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Thumpd3P97770 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Thumpd3P97770 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Thumpd3P97770 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thumpd3P97770 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Thumpd3P97770 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Thumpd3P97770 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Thumpd3P97770 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Thumpd3P97770 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.68■□□□□ 0.42
Thumpd3P97770 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Thumpd3P97770 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.68■□□□□ 0.42
Thumpd3P97770 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Thumpd3P97770 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Thumpd3P97770 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thumpd3P97770 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.67■□□□□ 0.42
Thumpd3P97770 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Thumpd3P97770 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.67■□□□□ 0.42
Thumpd3P97770 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Thumpd3P97770 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.67■□□□□ 0.42
Thumpd3P97770 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thumpd3P97770 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Thumpd3P97770 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd3P97770 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd3P97770 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
Thumpd3P97770 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.66■□□□□ 0.42
Thumpd3P97770 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.66■□□□□ 0.42
Thumpd3P97770 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd3P97770 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd3P97770 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd3P97770 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Thumpd3P97770 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd3P97770 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.64■□□□□ 0.42
Thumpd3P97770 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Thumpd3P97770 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Thumpd3P97770 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Thumpd3P97770 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.64■□□□□ 0.41
Thumpd3P97770 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Thumpd3P97770 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Thumpd3P97770 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Thumpd3P97770 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd3P97770 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms