Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col18a1P39061 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col18a1P39061 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col18a1P39061 Gm22199-201ENSMUST00000122660 126 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col18a1P39061 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 Gm4057-201ENSMUST00000221407 368 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 Gm23614-201ENSMUST00000082598 107 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col18a1P39061 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Col18a1P39061 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col18a1P39061 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm15025-201ENSMUST00000118434 418 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm25559-201ENSMUST00000157182 74 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm24850-201ENSMUST00000158029 119 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.86□□□□□ -1.47
Col18a1P39061 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC5.86□□□□□ -1.47
Col18a1P39061 Mir6993-201ENSMUST00000184912 65 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Trbv22-201ENSMUST00000191697 291 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm38149-201ENSMUST00000191943 339 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm36638-201ENSMUST00000193295 400 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm6929-201ENSMUST00000210930 468 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col18a1P39061 AC161054.1-201ENSMUST00000214319 184 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.86□□□□□ -1.47
Col18a1P39061 Olfr936-202ENSMUST00000216912 937 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm18704-201ENSMUST00000219736 446 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col18a1P39061 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col18a1P39061 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.86□□□□□ -1.47
Col18a1P39061 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.86□□□□□ -1.47
Col18a1P39061 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Col18a1P39061 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Col18a1P39061 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col18a1P39061 Gm23319-201ENSMUST00000104467 131 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm11522-201ENSMUST00000120533 176 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm9593-201ENSMUST00000166034 469 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm37523-201ENSMUST00000194901 412 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm44003-201ENSMUST00000203024 490 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm44023-201ENSMUST00000203710 469 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.85□□□□□ -1.47
Col18a1P39061 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Col18a1P39061 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm20946-201ENSMUST00000212367 461 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm22115-201ENSMUST00000103976 133 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm23923-201ENSMUST00000104108 133 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm25909-201ENSMUST00000157619 121 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm24853-201ENSMUST00000158026 121 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm26355-201ENSMUST00000158220 105 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Gm29452-201ENSMUST00000187996 313 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm28860-201ENSMUST00000188103 313 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm38234-201ENSMUST00000195204 421 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm44099-201ENSMUST00000203299 112 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm45553-201ENSMUST00000209929 507 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm29774-201ENSMUST00000219270 436 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Gm25141-201ENSMUST00000083177 107 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms