Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PrkdcP97313 CT010444.1-201ENSMUST00000219963 3845 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PrkdcP97313 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Gm22939-201ENSMUST00000103958 131 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Gm24819-201ENSMUST00000175094 166 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Gm9379-201ENSMUST00000196790 646 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Olfr1153-201ENSMUST00000052300 957 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC2.28□□□□□ -2.04
PrkdcP97313 Mir676-201ENSMUST00000102443 89 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Gm17421-201ENSMUST00000167845 674 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Gm6947-201ENSMUST00000186254 78 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Gm43992-201ENSMUST00000204358 197 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC2.28□□□□□ -2.04
PrkdcP97313 Gm6842-201ENSMUST00000211361 390 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PrkdcP97313 Gm22979-201ENSMUST00000082609 159 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
PrkdcP97313 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
PrkdcP97313 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC2.28□□□□□ -2.04
PrkdcP97313 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PrkdcP97313 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Gm15022-201ENSMUST00000122074 746 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Gm22073-201ENSMUST00000122668 189 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Gm24958-201ENSMUST00000158009 97 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.28□□□□□ -2.04
PrkdcP97313 AC100590.2-201ENSMUST00000219028 215 ntBASIC2.28□□□□□ -2.04
PrkdcP97313 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
PrkdcP97313 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PrkdcP97313 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PrkdcP97313 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
PrkdcP97313 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
PrkdcP97313 AC124562.2-201ENSMUST00000223888 2313 ntBASIC2.28□□□□□ -2.05
PrkdcP97313 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.28□□□□□ -2.05
PrkdcP97313 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC2.28□□□□□ -2.05
PrkdcP97313 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.05
PrkdcP97313 Gm25529-201ENSMUST00000104850 92 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.27□□□□□ -2.05
PrkdcP97313 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm43717-201ENSMUST00000198684 310 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PrkdcP97313 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PrkdcP97313 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm43696-201ENSMUST00000199385 6071 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm12667-201ENSMUST00000118299 1332 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PrkdcP97313 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm15180-201ENSMUST00000117745 492 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm27254-201ENSMUST00000183926 517 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.27□□□□□ -2.05
PrkdcP97313 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PrkdcP97313 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PrkdcP97313 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PrkdcP97313 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PrkdcP97313 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
PrkdcP97313 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm24443-201ENSMUST00000157242 132 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm37393-201ENSMUST00000195118 3870 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
PrkdcP97313 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Gm13865-201ENSMUST00000120957 865 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Gm5123-201ENSMUST00000121905 837 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Gm26477-201ENSMUST00000122617 323 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Gm5755-201ENSMUST00000152394 837 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PrkdcP97313 Gm28263-201ENSMUST00000185884 400 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC2.27□□□□□ -2.05
PrkdcP97313 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.27□□□□□ -2.05
PrkdcP97313 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 AC080021.1-201ENSMUST00000228104 700 ntBASIC2.27□□□□□ -2.05
PrkdcP97313 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.26□□□□□ -2.05
PrkdcP97313 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PrkdcP97313 AC165106.3-201ENSMUST00000228191 3843 ntBASIC2.26□□□□□ -2.05
PrkdcP97313 Gm42549-201ENSMUST00000202392 7004 ntBASIC2.26□□□□□ -2.05
PrkdcP97313 Gm13692-201ENSMUST00000120774 371 ntBASIC2.26□□□□□ -2.05
PrkdcP97313 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PrkdcP97313 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PrkdcP97313 Gm42621-201ENSMUST00000198114 275 ntBASIC2.26□□□□□ -2.05
PrkdcP97313 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PrkdcP97313 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PrkdcP97313 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms