Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col18a1P39061 Mir181a-2-201ENSMUST00000083489 76 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Col18a1P39061 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col18a1P39061 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.9□□□□□ -1.47
Col18a1P39061 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.9□□□□□ -1.47
Col18a1P39061 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Col18a1P39061 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC5.89□□□□□ -1.47
Col18a1P39061 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col18a1P39061 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm9043-201ENSMUST00000119677 314 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm23667-201ENSMUST00000157466 120 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm25977-201ENSMUST00000158697 85 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm23633-201ENSMUST00000175293 119 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Mir7093-201ENSMUST00000184195 101 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.89□□□□□ -1.47
Col18a1P39061 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm19739-201ENSMUST00000195941 153 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm43652-201ENSMUST00000196219 675 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm42453-201ENSMUST00000200477 409 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm44794-201ENSMUST00000206550 411 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm18602-201ENSMUST00000209794 851 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Gm17779-201ENSMUST00000213395 394 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 AC122225.1-201ENSMUST00000215641 369 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col18a1P39061 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.89□□□□□ -1.47
Col18a1P39061 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col18a1P39061 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col18a1P39061 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col18a1P39061 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col18a1P39061 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm11813-201ENSMUST00000118586 291 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm15193-201ENSMUST00000120224 865 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm11252-201ENSMUST00000120572 939 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm14473-201ENSMUST00000122269 557 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm23068-201ENSMUST00000158239 293 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm27942-201ENSMUST00000184669 101 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm38098-201ENSMUST00000194115 241 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm18672-201ENSMUST00000208035 270 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm44959-201ENSMUST00000209127 231 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.88□□□□□ -1.47
Col18a1P39061 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col18a1P39061 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Col18a1P39061 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col18a1P39061 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm25727-201ENSMUST00000104522 131 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm14530-201ENSMUST00000122391 333 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col18a1P39061 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm29550-201ENSMUST00000185543 285 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm29334-201ENSMUST00000190334 357 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm18900-201ENSMUST00000193218 584 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm17781-201ENSMUST00000195232 649 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col18a1P39061 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm45312-201ENSMUST00000210566 311 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col18a1P39061 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col18a1P39061 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.88□□□□□ -1.47
Col18a1P39061 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col18a1P39061 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col18a1P39061 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.87□□□□□ -1.47
Col18a1P39061 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col18a1P39061 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms