Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm25967-201ENSMUST00000157168 147 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.31□□□□□ -2.04
PrkdcP97313 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.31□□□□□ -2.04
PrkdcP97313 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm44582-201ENSMUST00000209125 445 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
PrkdcP97313 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm37677-201ENSMUST00000194520 7634 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm14811-201ENSMUST00000117070 117 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm12998-201ENSMUST00000122445 789 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm44844-201ENSMUST00000207242 336 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm19154-201ENSMUST00000223330 940 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
PrkdcP97313 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
PrkdcP97313 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm12025-201ENSMUST00000117768 144 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm15103-201ENSMUST00000119893 871 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm11414-201ENSMUST00000121795 263 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PrkdcP97313 AC134333.1-201ENSMUST00000204536 944 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 AC133283.1-201ENSMUST00000228443 859 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PrkdcP97313 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PrkdcP97313 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm14816-201ENSMUST00000117174 294 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm22141-201ENSMUST00000157403 277 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm25037-201ENSMUST00000175418 110 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm45710-201ENSMUST00000212847 215 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm23302-201ENSMUST00000082710 100 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PrkdcP97313 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm22666-201ENSMUST00000158717 164 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm23775-201ENSMUST00000158991 249 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PrkdcP97313 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 AC167669.1-201ENSMUST00000224932 384 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PrkdcP97313 Gm45264-201ENSMUST00000210090 3995 ntBASIC2.3□□□□□ -2.04
PrkdcP97313 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PrkdcP97313 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
PrkdcP97313 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm15212-201ENSMUST00000122403 466 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.29□□□□□ -2.04
PrkdcP97313 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm9762-201ENSMUST00000036976 444 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm43872-201ENSMUST00000203218 2213 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm12787-201ENSMUST00000119234 396 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm16260-201ENSMUST00000155141 304 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Mir3076-201ENSMUST00000175415 60 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm2719-201ENSMUST00000191929 444 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm19596-201ENSMUST00000203685 739 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm18000-201ENSMUST00000212153 800 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm9845-201ENSMUST00000056409 598 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm43319-201ENSMUST00000198036 2270 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm25377-201ENSMUST00000104334 129 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm12873-201ENSMUST00000119988 422 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm17187-201ENSMUST00000164622 410 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm28574-201ENSMUST00000185757 699 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm28596-201ENSMUST00000185870 696 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm28397-201ENSMUST00000187970 699 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm29525-201ENSMUST00000189844 699 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm29523-201ENSMUST00000191415 699 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm32295-201ENSMUST00000192558 696 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm31260-201ENSMUST00000193478 696 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.29□□□□□ -2.04
PrkdcP97313 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.29□□□□□ -2.04
PrkdcP97313 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC2.29□□□□□ -2.04
PrkdcP97313 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
PrkdcP97313 Gm18189-201ENSMUST00000218153 1951 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms