Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm8672-201ENSMUST00000221200 332 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Gm3086-202ENSMUST00000221248 310 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm22072-201ENSMUST00000116850 121 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm14575-201ENSMUST00000117210 560 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm11913-201ENSMUST00000119094 336 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm23365-201ENSMUST00000175019 125 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm25960-201ENSMUST00000175110 125 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm44453-201ENSMUST00000175161 126 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm25195-201ENSMUST00000177656 126 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm38281-201ENSMUST00000192301 315 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm37104-201ENSMUST00000193278 196 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm37791-201ENSMUST00000195081 286 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm44853-201ENSMUST00000209070 250 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.91□□□□□ -1.46
Col18a1P39061 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 AC163646.2-201ENSMUST00000227962 141 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col18a1P39061 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm24921-201ENSMUST00000083024 107 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Col18a1P39061 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Gm42996-201ENSMUST00000196116 1636 ntBASIC5.91□□□□□ -1.46
Col18a1P39061 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col18a1P39061 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
Col18a1P39061 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col18a1P39061 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.9□□□□□ -1.46
Col18a1P39061 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC5.9□□□□□ -1.46
Col18a1P39061 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col18a1P39061 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col18a1P39061 Gm24415-201ENSMUST00000180218 107 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Gm27699-201ENSMUST00000183553 180 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Mir6385-201ENSMUST00000184295 105 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Gm8939-201ENSMUST00000192577 964 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.9□□□□□ -1.46
Col18a1P39061 Gm35702-201ENSMUST00000198653 511 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Gm22364-201ENSMUST00000083097 98 ntBASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Col18a1P39061 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col18a1P39061 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col18a1P39061 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col18a1P39061 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col18a1P39061 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col18a1P39061 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Col18a1P39061 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col18a1P39061 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col18a1P39061 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col18a1P39061 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col18a1P39061 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col18a1P39061 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col18a1P39061 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col18a1P39061 Gm12889-201ENSMUST00000118684 241 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm11262-201ENSMUST00000119326 833 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm26255-201ENSMUST00000122492 103 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col18a1P39061 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col18a1P39061 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.9□□□□□ -1.47
Col18a1P39061 Gm23112-201ENSMUST00000158606 125 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm23025-201ENSMUST00000158769 111 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm23215-201ENSMUST00000178153 121 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm28389-201ENSMUST00000190090 697 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm36891-201ENSMUST00000191995 655 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm18403-201ENSMUST00000192907 529 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm43855-201ENSMUST00000197462 507 ntBASIC5.9□□□□□ -1.47
Col18a1P39061 Gm44773-201ENSMUST00000207374 557 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 191.3 ms