Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 Gm37626-201ENSMUST00000194332 4563 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 AC124572.2-201ENSMUST00000218041 5152 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Gm43341-201ENSMUST00000200104 1308 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Gm26028-201ENSMUST00000158660 294 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PrkdcP97313 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm12261-201ENSMUST00000117499 645 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm24816-201ENSMUST00000175311 151 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm27783-201ENSMUST00000183534 105 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.32□□□□□ -2.04
PrkdcP97313 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
PrkdcP97313 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
PrkdcP97313 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PrkdcP97313 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm11896-201ENSMUST00000121105 820 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm28900-201ENSMUST00000185232 156 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 AC153948.1-201ENSMUST00000219080 3838 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm26247-201ENSMUST00000116702 91 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC2.32□□□□□ -2.04
PrkdcP97313 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm24949-201ENSMUST00000183609 215 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm37946-201ENSMUST00000192064 347 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm20946-201ENSMUST00000212367 461 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
PrkdcP97313 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PrkdcP97313 Gm23803-201ENSMUST00000104610 132 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm13717-201ENSMUST00000119868 365 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Gm4859-201ENSMUST00000199625 787 ntBASIC2.32□□□□□ -2.04
PrkdcP97313 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PrkdcP97313 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PrkdcP97313 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm14627-201ENSMUST00000118931 567 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm13064-201ENSMUST00000119125 557 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm2892-201ENSMUST00000145537 711 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21842-201ENSMUST00000177552 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21626-201ENSMUST00000177791 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21562-201ENSMUST00000177888 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21539-201ENSMUST00000177925 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17522-201ENSMUST00000178144 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21599-201ENSMUST00000178249 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21914-201ENSMUST00000178452 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21723-201ENSMUST00000178692 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21916-201ENSMUST00000178771 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21801-201ENSMUST00000178865 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21633-201ENSMUST00000178941 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17412-201ENSMUST00000179261 468 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21821-201ENSMUST00000179646 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21588-201ENSMUST00000180074 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21780-201ENSMUST00000180128 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21572-201ENSMUST00000180134 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm21529-201ENSMUST00000180175 498 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm28594-201ENSMUST00000187022 661 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm29370-202ENSMUST00000187476 499 ntBASIC2.31□□□□□ -2.04
PrkdcP97313 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PrkdcP97313 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PrkdcP97313 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms