Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PrkdcP97313 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PrkdcP97313 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 AC122397.2-201ENSMUST00000227422 686 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm10484-201ENSMUST00000196372 4759 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm42486-201ENSMUST00000200369 3486 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
PrkdcP97313 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm8744-201ENSMUST00000204475 3581 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm14518-201ENSMUST00000117351 542 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm26297-201ENSMUST00000179464 132 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm43214-201ENSMUST00000199242 352 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
PrkdcP97313 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm18913-201ENSMUST00000204311 1789 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 AC135669.2-201ENSMUST00000215636 4958 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm38065-201ENSMUST00000193147 3492 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PrkdcP97313 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm5943-201ENSMUST00000119458 459 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm14810-201ENSMUST00000121628 486 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC2.35□□□□□ -2.03
PrkdcP97313 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
PrkdcP97313 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm44688-201ENSMUST00000209083 537 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm18363-201ENSMUST00000221671 730 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm2987-201ENSMUST00000187673 1693 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
PrkdcP97313 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
PrkdcP97313 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
PrkdcP97313 Gm336-201ENSMUST00000186376 1480 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Gm23123-201ENSMUST00000157648 144 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Gm22187-201ENSMUST00000157819 129 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
PrkdcP97313 Gm37329-201ENSMUST00000192973 2057 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
PrkdcP97313 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.34□□□□□ -2.03
PrkdcP97313 Gm11229-201ENSMUST00000121993 437 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Gm22227-201ENSMUST00000157356 259 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Gm22651-201ENSMUST00000157872 94 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Gm26061-201ENSMUST00000175584 108 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Gm18944-201ENSMUST00000207672 643 ntBASIC2.34□□□□□ -2.03
PrkdcP97313 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PrkdcP97313 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
PrkdcP97313 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
PrkdcP97313 Nsd1-207ENSMUST00000224973 9905 ntBASIC2.34□□□□□ -2.04
PrkdcP97313 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PrkdcP97313 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PrkdcP97313 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PrkdcP97313 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PrkdcP97313 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PrkdcP97313 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
PrkdcP97313 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PrkdcP97313 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
PrkdcP97313 Gm11456-201ENSMUST00000121070 256 ntBASIC2.34□□□□□ -2.04
PrkdcP97313 Gm24059-201ENSMUST00000157493 312 ntBASIC2.34□□□□□ -2.04
PrkdcP97313 Mir3070b-201ENSMUST00000175205 89 ntBASIC2.34□□□□□ -2.04
PrkdcP97313 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
PrkdcP97313 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.34□□□□□ -2.04
PrkdcP97313 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.04
PrkdcP97313 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
PrkdcP97313 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.34□□□□□ -2.04
PrkdcP97313 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Gm13167-201ENSMUST00000118554 578 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Mir6401-201ENSMUST00000184499 109 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Gm18843-201ENSMUST00000194982 719 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PrkdcP97313 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PrkdcP97313 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 AC153532.2-201ENSMUST00000219753 3844 ntBASIC2.33□□□□□ -2.04
PrkdcP97313 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC2.33□□□□□ -2.04
PrkdcP97313 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PrkdcP97313 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
PrkdcP97313 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 124.2 ms