Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm37504-201ENSMUST00000192537 2374 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.55□□□□□ -1.84
Col4a4Q9QZR9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Gm14901-201ENSMUST00000119001 283 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Gm44371-201ENSMUST00000204148 467 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Gm19039-201ENSMUST00000204363 575 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col4a4Q9QZR9 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Gm11746-201ENSMUST00000119843 821 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Gm19232-201ENSMUST00000211621 652 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Gm26063-201ENSMUST00000083378 107 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col4a4Q9QZR9 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm24898-201ENSMUST00000158133 106 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm27893-201ENSMUST00000184408 194 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm29668-201ENSMUST00000187802 315 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm38217-201ENSMUST00000194358 910 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm22249-201ENSMUST00000082485 136 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm15212-201ENSMUST00000122403 466 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm23791-201ENSMUST00000122553 293 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm6969-201ENSMUST00000140065 342 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm22361-201ENSMUST00000158435 176 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm7870-201ENSMUST00000184467 616 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Gm43655-201ENSMUST00000197367 222 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a4Q9QZR9 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 AC166323.1-201ENSMUST00000217756 367 ntBASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col4a4Q9QZR9 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col4a4Q9QZR9 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 303.7 ms