Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm43295-201ENSMUST00000201439 412 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm29815-201ENSMUST00000202418 178 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm18903-201ENSMUST00000215343 480 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm23443-201ENSMUST00000082916 128 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col18a1P39061 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col18a1P39061 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col18a1P39061 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col18a1P39061 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.99□□□□□ -1.45
Col18a1P39061 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col18a1P39061 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC5.99□□□□□ -1.45
Col18a1P39061 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Col18a1P39061 Gm14299-201ENSMUST00000117586 397 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm13355-201ENSMUST00000117996 317 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm12458-201ENSMUST00000119387 495 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm12313-201ENSMUST00000121347 421 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm16412-201ENSMUST00000121602 273 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm22841-201ENSMUST00000158443 62 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm10177-202ENSMUST00000161698 207 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm24418-201ENSMUST00000177597 79 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm24639-201ENSMUST00000178518 79 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm23076-201ENSMUST00000179082 79 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm25077-201ENSMUST00000179157 79 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm29408-201ENSMUST00000187536 216 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm21803-201ENSMUST00000188897 693 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm37603-201ENSMUST00000192368 219 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm43345-201ENSMUST00000199484 269 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.98□□□□□ -1.45
Col18a1P39061 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm18338-201ENSMUST00000222381 560 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col18a1P39061 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm12379-201ENSMUST00000119607 391 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm15899-201ENSMUST00000128586 238 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.98□□□□□ -1.45
Col18a1P39061 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC5.98□□□□□ -1.45
Col18a1P39061 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm26148-201ENSMUST00000157430 68 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm26426-201ENSMUST00000177866 123 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm23977-201ENSMUST00000177871 74 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm26060-201ENSMUST00000180094 123 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Ighv1-28-201ENSMUST00000192987 351 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm43384-201ENSMUST00000200569 637 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm43039-201ENSMUST00000202883 963 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm44295-201ENSMUST00000203805 437 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col18a1P39061 Gm18120-201ENSMUST00000220079 511 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.98□□□□□ -1.45
Col18a1P39061 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Gm25810-201ENSMUST00000082752 108 ntBASIC5.98□□□□□ -1.45
Col18a1P39061 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col18a1P39061 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col18a1P39061 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col18a1P39061 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col18a1P39061 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col18a1P39061 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col18a1P39061 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col18a1P39061 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col18a1P39061 Gm13627-201ENSMUST00000119700 706 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Gm12704-201ENSMUST00000119789 464 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Gm5287-201ENSMUST00000120666 598 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Gm8200-201ENSMUST00000122390 222 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.97□□□□□ -1.45
Col18a1P39061 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.97□□□□□ -1.45
Col18a1P39061 Gm25434-201ENSMUST00000158278 167 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Gm22675-201ENSMUST00000158430 104 ntBASIC5.97□□□□□ -1.45
Col18a1P39061 Gm5929-201ENSMUST00000166883 487 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 153.3 ms