Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm28314-201ENSMUST00000191276 345 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm43856-201ENSMUST00000197004 369 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm44294-201ENSMUST00000205090 728 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC6.01□□□□□ -1.45
Col18a1P39061 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm24460-201ENSMUST00000082731 106 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Col18a1P39061 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col18a1P39061 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col18a1P39061 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Col18a1P39061 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm45804-201ENSMUST00000212137 3435 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col18a1P39061 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm23591-201ENSMUST00000157663 286 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm27036-201ENSMUST00000182465 980 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm19243-201ENSMUST00000198592 269 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC6.01□□□□□ -1.45
Col18a1P39061 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm45796-201ENSMUST00000212483 114 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 AC164883.9-201ENSMUST00000228042 399 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col18a1P39061 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col18a1P39061 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col18a1P39061 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col18a1P39061 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col18a1P39061 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col18a1P39061 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC6□□□□□ -1.45
Col18a1P39061 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6□□□□□ -1.45
Col18a1P39061 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col18a1P39061 Gm13121-201ENSMUST00000120637 632 ntBASIC6□□□□□ -1.45
Col18a1P39061 Gm13743-201ENSMUST00000121486 724 ntBASIC6□□□□□ -1.45
Col18a1P39061 n-R5s30-201ENSMUST00000122624 122 ntBASIC6□□□□□ -1.45
Col18a1P39061 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC6□□□□□ -1.45
Col18a1P39061 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6□□□□□ -1.45
Col18a1P39061 Gm25066-201ENSMUST00000158145 123 ntBASIC6□□□□□ -1.45
Col18a1P39061 Gm17194-201ENSMUST00000164610 348 ntBASIC6□□□□□ -1.45
Col18a1P39061 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6□□□□□ -1.45
Col18a1P39061 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6□□□□□ -1.45
Col18a1P39061 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC6□□□□□ -1.45
Col18a1P39061 Gm19457-201ENSMUST00000200995 448 ntBASIC6□□□□□ -1.45
Col18a1P39061 Gm34779-201ENSMUST00000210036 263 ntBASIC6□□□□□ -1.45
Col18a1P39061 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC6□□□□□ -1.45
Col18a1P39061 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6□□□□□ -1.45
Col18a1P39061 Gm18116-201ENSMUST00000220920 537 ntBASIC6□□□□□ -1.45
Col18a1P39061 AC116589.7-201ENSMUST00000221061 239 ntBASIC6□□□□□ -1.45
Col18a1P39061 AC164117.1-201ENSMUST00000221726 239 ntBASIC6□□□□□ -1.45
Col18a1P39061 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6□□□□□ -1.45
Col18a1P39061 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6□□□□□ -1.45
Col18a1P39061 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col18a1P39061 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC6□□□□□ -1.45
Col18a1P39061 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col18a1P39061 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col18a1P39061 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col18a1P39061 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
Col18a1P39061 Gm18757-201ENSMUST00000207938 3141 ntBASIC6□□□□□ -1.45
Col18a1P39061 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col18a1P39061 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col18a1P39061 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Col18a1P39061 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col18a1P39061 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm25316-201ENSMUST00000116826 118 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm22091-201ENSMUST00000116908 127 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.99□□□□□ -1.45
Col18a1P39061 Gm23024-201ENSMUST00000158770 292 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col18a1P39061 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col18a1P39061 Gm37881-201ENSMUST00000193001 421 ntBASIC5.99□□□□□ -1.45
Col18a1P39061 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 228.5 ms