Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm11708-201ENSMUST00000119530 832 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm17085-201ENSMUST00000165425 502 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm24520-201ENSMUST00000179510 110 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm28343-201ENSMUST00000185386 112 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm29556-201ENSMUST00000187591 696 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm18291-201ENSMUST00000190791 301 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm44055-201ENSMUST00000204376 247 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm44060-201ENSMUST00000204440 410 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm20074-201ENSMUST00000208144 484 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm7624-201ENSMUST00000209702 435 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col18a1P39061 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col18a1P39061 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col18a1P39061 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 AC115970.1-201ENSMUST00000218910 1758 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm25595-201ENSMUST00000102273 97 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm24788-201ENSMUST00000104283 156 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm25908-201ENSMUST00000157624 98 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm16125-201ENSMUST00000159003 339 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm10357-201ENSMUST00000159886 264 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm3191-201ENSMUST00000167139 346 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm29552-201ENSMUST00000190548 660 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm18225-201ENSMUST00000216708 742 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm25404-201ENSMUST00000082970 107 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr713-201ENSMUST00000098139 975 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col18a1P39061 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm25168-201ENSMUST00000104189 132 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.02□□□□□ -1.45
Col18a1P39061 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm7346-201ENSMUST00000169661 476 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 Gm37353-201ENSMUST00000194497 313 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm8820-201ENSMUST00000204077 571 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.02□□□□□ -1.45
Col18a1P39061 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.02□□□□□ -1.45
Col18a1P39061 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col18a1P39061 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col18a1P39061 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col18a1P39061 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col18a1P39061 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.02□□□□□ -1.45
Col18a1P39061 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Col18a1P39061 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm42639-201ENSMUST00000197061 1871 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm22771-201ENSMUST00000104449 91 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm15783-201ENSMUST00000117521 633 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm13640-201ENSMUST00000118445 264 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm11313-201ENSMUST00000118779 432 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm11829-201ENSMUST00000121003 282 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm13409-201ENSMUST00000122072 546 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC6.01□□□□□ -1.45
Col18a1P39061 Gm18522-201ENSMUST00000173947 650 ntBASIC6.01□□□□□ -1.45
Col18a1P39061 Gm22621-201ENSMUST00000179678 74 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms